Factsheet for TraesCS2D01G291000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G293200.1	Wheat	cytosol	99.53	99.53
TraesCS2B01G309700.1	Wheat	cytosol	99.3	99.3
EES10729	Sorghum	cytosol	96.28	96.28
HORVU2Hr1G072600.1	Barley	endoplasmic reticulum	53.72	93.15
Zm00001d003813_P001	Maize	cytosol	93.49	89.93
VIT_06s0061g01510.t01	Wine grape	cytosol, mitochondrion, nucleus	86.05	86.05
VIT_15s0021g00610.t01	Wine grape	cytosol	85.58	85.58
KRH25183	Soybean	cytosol	84.65	84.85
PGSC0003DMT400068240	Potato	cytosol	78.14	84.63
KRH30495	Soybean	cytosol	84.19	84.38
Solyc11g067020.1.1	Tomato	cytosol	83.95	83.95
AT3G44680.1	Thale cress	cytosol	80.0	80.75
CDX99186	Canola	cytosol	79.3	80.05
Bra019424.1-P	Field mustard	cytosol	79.3	80.05
CDY08684	Canola	cytosol, mitochondrion, nucleus, peroxisome	74.42	79.8
GSMUA_Achr6P17260_001	Banana	plastid	87.21	78.12
HORVU2Hr1G072570.5	Barley	plastid	48.84	74.73
Os04t0409600-01	Rice	cytosol	31.86	72.87
AT3G44490.1	Thale cress	cytosol	26.74	72.78
AT3G44660.1	Thale cress	cytoskeleton, cytosol, nucleus	23.72	71.83
TraesCS6D01G168400.1	Wheat	cytosol	53.26	50.0
TraesCS7D01G356800.1	Wheat	nucleus	59.53	49.33
TraesCS6D01G171000.1	Wheat	golgi	59.53	44.6
TraesCS4D01G100000.1	Wheat	cytosol	42.79	39.07
TraesCS5D01G302400.1	Wheat	cytosol	42.56	36.97
TraesCS7D01G360500.1	Wheat	plastid	18.37	22.38
TraesCS1D01G317100.1	Wheat	mitochondrion	19.3	21.07
TraesCS3D01G422300.1	Wheat	cytosol	14.88	19.57
TraesCS1D01G274900.1	Wheat	cytosol, nucleus, plastid	16.51	19.4
TraesCS5D01G126600.1	Wheat	mitochondrion, plastid, vacuole	17.21	16.67
TraesCS5D01G076100.1	Wheat	nucleus	20.7	14.54
TraesCS2D01G185200.1	Wheat	cytosol, golgi	21.4	13.28

Protein Annotations

MapMan:12.3.2.1.1	MapMan:12.3.2.1.4.1	Gene3D:3.40.800.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0004407
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016575
GO:GO:0016787	GO:GO:0019538	InterPro:His_deacetylse	InterPro:His_deacetylse_1	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf
InterPro:IPR037138	PFAM:PF00850	PIRSF:PIRSF037913	PRINTS:PR01270	PRINTS:PR01271	PANTHER:PTHR10625
PANTHER:PTHR10625:SF171	SUPFAM:SSF52768	EnsemblPlantsGene:TraesCS2D01G291000	EnsemblPlants:TraesCS2D01G291000.1	InterPro:Ureohydrolase_dom_sf	SEG:seg

Description

No Description!

Coordinates

chr2D:+:373215941..373221363

Molecular Weight (calculated)

49164.9 Da

IEP (calculated)

4.810

GRAVY (calculated)

-0.427

Length

430 amino acids

Sequence
(BLAST)

001: MLEKDRISYF YDGDVGNVYF GPNHPMKPHR LCMTHHLVLS YDLHKKMEIY RPHKAYPTEL AQFHSADYVE FLHRITPDTQ HLYASELTRY NLGEDCPVFD
101: DLFEFCQIYA GGTLDAARRL NHKTCDIAIN WAGGLHHAKK CEASGFCYIN DLVLGILELL KYHARVLYID IDVHHGDGVE EAFYFTDRVM TVSFHKYGDM
201: FFPGTGDIKD IGDREGKYYA INIPLKDGID DTSFTRLFKT IIAKVVETYL PGAIVLQCGA DSLARDRLGC FNLSIEGHAE CVKFVKKFKI PLLVTGGGGY
301: TKENVARCWA VETGVLLDTE LPNEIPDNEY IEYFGPDYTL KVPNLNMDNL NSKTYLSSIK VQVMESLRAI QHAPGVQMQE VPPDFYVPDF DEDELDPDER
401: VDQHTQDKQV HRDDEYYEGD NDNDHDDGGH

Best Arabidopsis Sequence Match ( AT3G44680.1 )
(BLAST)

001: MRSKDKISYF YDGDVGSVYF GPNHPMKPHR LCMTHHLILA YGLHSKMEVY RPHKAYPIEM AQFHSPDYVE FLQRINPENQ NLFPNEMARY NLGEDCPVFE
101: DLFEFCQLYA GGTIDAARRL NNKLCDIAIN WAGGLHHAKK CDASGFCYIN DLVLGILELL KHHPRVLYID IDVHHGDGVE EAFYFTDRVM TVSFHKFGDK
201: FFPGTGDVKE IGEREGKFYA INVPLKDGID DSSFNRLFRT IISKVVEIYQ PGAIVLQCGA DSLARDRLGC FNLSIDGHAE CVKFVKKFNL PLLVTGGGGY
301: TKENVARCWT VETGILLDTE LPNEIPENDY IKYFAPDFSL KIPGGHIENL NTKSYISSIK VQILENLRYI QHAPSVQMQE VPPDFYIPDF DEDEQNPDVR
401: ADQRSRDKQI QRDDEYFDGD NDNDAS

Arabidopsis Description

HDA9Histone deacetylase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.