Factsheet for TraesCS5D01G126600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, vacuole

Predictor Summary:

plastid 3
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid, vacuole
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G119300.2	Wheat	mitochondrion	97.52	97.52
TraesCS5B01G121300.1	Wheat	vacuole	97.52	95.58
HORVU5Hr1G037920.1	Barley	cytosol	94.59	92.92
Zm00001d042974_P001	Maize	mitochondrion	43.69	90.23
Os12t0182700-01	Rice	mitochondrion	82.88	83.07
EES01710	Sorghum	plastid	77.93	80.47
Solyc01g009110.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid	45.95	76.98
GSMUA_AchrUn_...	Banana	cytosol	69.14	69.3
VIT_04s0044g01510.t01	Wine grape	mitochondrion	65.09	66.13
KRH59585	Soybean	plastid	61.26	64.76
AT4G33470.1	Thale cress	plastid	59.91	62.88
CDX68980	Canola	mitochondrion, plastid	59.91	62.59
CDX75356	Canola	plastid	59.91	62.59
Bra011444.1-P	Field mustard	golgi, vacuole	59.91	59.24
VIT_13s0106g00170.t01	Wine grape	cytosol, golgi, plastid	24.77	32.64
TraesCS1D01G317100.1	Wheat	mitochondrion	25.23	28.43
TraesCS3D01G422300.1	Wheat	cytosol	20.72	28.13
TraesCS1D01G274900.1	Wheat	cytosol, nucleus, plastid	17.12	20.77
TraesCS5D01G076100.1	Wheat	nucleus	25.45	18.46
TraesCS6D01G168400.1	Wheat	cytosol	18.02	17.47
TraesCS2D01G185200.1	Wheat	cytosol, golgi	27.03	17.32
TraesCS2D01G291000.1	Wheat	cytosol	16.67	17.21
TraesCS7D01G360500.1	Wheat	plastid	13.51	17.0
TraesCS4D01G100000.1	Wheat	cytosol	17.12	16.14
TraesCS7D01G356800.1	Wheat	nucleus	17.79	15.22
TraesCS6D01G171000.1	Wheat	golgi	19.14	14.81
TraesCS5D01G302400.1	Wheat	cytosol	15.77	14.14

Protein Annotations

MapMan:12.3.2.1.2	Gene3D:3.40.800.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0042903	GO:GO:0043014	GO:GO:0043621	GO:GO:0048487
GO:GO:0051721	GO:GO:0090042	InterPro:His_deacetylse	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf	InterPro:IPR037138
PFAM:PF00850	PRINTS:PR01270	PANTHER:PTHR10625	PANTHER:PTHR10625:SF175	SUPFAM:SSF52768	EnsemblPlantsGene:TraesCS5D01G126600
EnsemblPlants:TraesCS5D01G126600.1	InterPro:Ureohydrolase_dom_sf	TIGR:cd09992	:	:	:

Description

No Description!

Coordinates

chr5D:+:193511302..193520998

Molecular Weight (calculated)

47810.1 Da

IEP (calculated)

6.754

GRAVY (calculated)

-0.086

Length

444 amino acids

Sequence
(BLAST)

001: MELLRIPPSL PILGGTVFPL LRQYRVYGTH HSLTWSSLQT TGRKQNLNGG RSAQCATSHG GASVSHANGA PKDSPLPDSL LRDARILYCA SPAMGHNKEA
101: HPESNKRVPA IVDALEKLEL TPKHRGSQVL EIQNFYPASL DDVARVHSRT YITGLEKAIS KVLDEGLIFI EGTGPTYATQ TTFAESLLSA GAGITLVDSV
201: VAASKLGLSP PLGFALIRPP GHHAVPEGPM GFCVFGNIAV AARYAQCQHG LKRVMIIDFD VHHGNGTCDA FYDDPDIFFL STHQLGSYPG TGKMNLIGQG
301: SGEGTTLNLP LPGGSGDYSM RCAFDEVIAP SAQRFKPDII LVSAGYDAHA LDPLAGLQFT TGTFYMLASS IKQLARELCS GRCVFFLEGG YNLQSLSSSV
401: ADTFRAFLDE PSLAAQFDDP AMLYEEPTRR IKEAIEKVRH LHSL

Best Arabidopsis Sequence Match ( AT4G33470.1 )
(BLAST)

001: MSMALIVRPF FVPGSAGISG SRNICKKNQW RKYLLKPSGS SINCSFSTEK NPLLPSIQQL ADARLIYSVS AALGHNKESH PECSARVPAI VNALEMNELT
101: PKFRGSQILE LANFKTATVE DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI AASRNSVDPP IGFALIRPPG
201: HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR
301: TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA
401: YLYDEPMRKV RDAIQRAKSI HCL

Arabidopsis Description

HDA14Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A178V1U6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.