Factsheet for TraesCS5B01G121300.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G126600.1	Wheat	mitochondrion, plastid, vacuole	95.58	97.52
TraesCS5A01G119300.2	Wheat	mitochondrion	94.92	96.85
HORVU5Hr1G037920.1	Barley	cytosol	93.82	94.03
Zm00001d042974_P001	Maize	mitochondrion	42.6	89.77
Os12t0182700-01	Rice	mitochondrion	81.24	83.07
EES01710	Sorghum	plastid	77.04	81.16
Solyc01g009110.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid	45.03	76.98
GSMUA_AchrUn_...	Banana	cytosol	67.99	69.53
VIT_04s0044g01510.t01	Wine grape	mitochondrion	64.68	67.05
KRH59585	Soybean	plastid	60.71	65.48
AT4G33470.1	Thale cress	plastid	59.38	63.59
CDX68980	Canola	mitochondrion, plastid	59.38	63.29
CDX75356	Canola	plastid	59.38	63.29
Bra011444.1-P	Field mustard	golgi, vacuole	59.38	59.91
VIT_13s0106g00170.t01	Wine grape	cytosol, golgi, plastid	24.28	32.64
TraesCS1B01G329500.1	Wheat	cytosol	24.5	28.46
TraesCS3B01G318000.1	Wheat	cytoskeleton, cytosol, nucleus	21.19	25.26
TraesCS1B01G284500.1	Wheat	cytosol, nucleus, plastid	19.21	22.14
TraesCS5B01G072100.1	Wheat	nucleus	24.94	18.4
TraesCS2B01G204100.1	Wheat	cytosol	26.49	17.32
TraesCS6B01G210200.1	Wheat	cytosol	17.44	17.25
TraesCS2B01G309700.1	Wheat	cytosol	15.89	16.74
TraesCS7B01G266000.1	Wheat	plastid	13.02	16.71
TraesCS4B01G102600.1	Wheat	cytosol, mitochondrion, nucleus	16.78	16.14
TraesCS7B01G261800.1	Wheat	nucleus	17.66	15.41
TraesCS6B01G212600.3	Wheat	nucleus	17.66	15.38

Protein Annotations

MapMan:12.3.2.1.2	Gene3D:3.40.800.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0042903	GO:GO:0043014	GO:GO:0043621	GO:GO:0048487
GO:GO:0051721	GO:GO:0090042	InterPro:His_deacetylse	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf	InterPro:IPR037138
PFAM:PF00850	PRINTS:PR01270	PANTHER:PTHR10625	PANTHER:PTHR10625:SF175	SUPFAM:SSF52768	EnsemblPlantsGene:TraesCS5B01G121300
EnsemblPlants:TraesCS5B01G121300.1	InterPro:Ureohydrolase_dom_sf	TIGR:cd09992	:	:	:

Description

No Description!

Coordinates

chr5B:+:216399453..216403710

Molecular Weight (calculated)

48985.5 Da

IEP (calculated)

6.401

GRAVY (calculated)

-0.066

Length

453 amino acids

Sequence
(BLAST)

001: MELLRIPLSL PILGDSCLPL LSGSVFPLLR QYCVYGTHDS LTWSSLQTTR RKQNLNGGRW SAQCATSHDG ASVSHVNGAP KDSPLPDSLL RDARILYCAS
101: PAMGHNKEAH PESNKRVPAI VDALEKLELT PKHRGSQVLE IQNFYPASLD DVARVHSRTY ITGLEKAMSK ALDEGLIFIE GTGPTYATQT TFTESLLSAG
201: AGITLVDSVV AASKLGLSPP LGFALIRPPG HHAVPEGPMG FCVFGNIAVA ARYAQCQHGL KRVMIIDFDV HHGNGTCDAF YDDPDIFFLS THQLGSYPGT
301: GKMNLIGQGS GEGTTLNLPL PGGSGDYSMR CAFDEVIAPS AQRFKPDIIL VSAGYDAHVL DPLAGLQFTT GTFYMLASSI KQLARELCSG RCVFFLEGGY
401: NLQSLSSSVA DTFRAFLDEP SLAAQFDDPA MLYEEPTRRI KEAIEKVRHL HSL

Best Arabidopsis Sequence Match ( AT4G33470.1 )
(BLAST)

001: MSMALIVRPF FVPGSAGISG SRNICKKNQW RKYLLKPSGS SINCSFSTEK NPLLPSIQQL ADARLIYSVS AALGHNKESH PECSARVPAI VNALEMNELT
101: PKFRGSQILE LANFKTATVE DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI AASRNSVDPP IGFALIRPPG
201: HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR
301: TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA
401: YLYDEPMRKV RDAIQRAKSI HCL

Arabidopsis Description

HDA14Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A178V1U6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.