Factsheet for Solyc01g009110.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, nucleus, cytosol

Predictor Summary:

plastid 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	endoplasmic reticulum
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042974_P001	Maize	mitochondrion	62.64	77.21
KRH59585	Soybean	plastid	80.38	50.71
AT4G33470.1	Thale cress	plastid	78.11	48.94
CDX68980	Canola	mitochondrion, plastid	77.74	48.47
CDX75356	Canola	plastid	77.74	48.47
EES01710	Sorghum	plastid	76.98	47.44
GSMUA_AchrUn_...	Banana	cytosol	78.11	46.73
Bra011444.1-P	Field mustard	golgi, vacuole	78.11	46.1
TraesCS5A01G119300.2	Wheat	mitochondrion	76.98	45.95
TraesCS5D01G126600.1	Wheat	mitochondrion, plastid, vacuole	76.98	45.95
Os12t0182700-01	Rice	mitochondrion	75.85	45.37
TraesCS5B01G121300.1	Wheat	vacuole	76.98	45.03
HORVU5Hr1G037920.1	Barley	cytosol	76.6	44.91
VIT_13s0106g00170.t01	Wine grape	cytosol, golgi, plastid	44.91	35.31
Solyc06g074080.2.1	Tomato	cytosol	27.55	18.96
Solyc03g119730.2.1	Tomato	nucleus	33.96	14.75
Solyc03g115150.2.1	Tomato	cytosol	34.72	14.22
Solyc03g112410.1.1	Tomato	cytosol	23.77	14.03
Solyc08g065350.2.1	Tomato	cytosol	17.74	13.54
Solyc11g067020.1.1	Tomato	cytosol	21.89	13.49
Solyc06g071680.2.1	Tomato	cytosol	23.02	12.95
Solyc09g091440.2.1	Tomato	nucleus	24.15	12.85

Protein Annotations

EnsemblPlants:Solyc01g009110.2.1	EnsemblPlantsGene:Solyc01g009110.2	Gene3D:3.40.800.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:His_deacetylse	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf	InterPro:IPR037138	InterPro:Ureohydrolase_dom_sf	PANTHER:PTHR10625
PANTHER:PTHR10625:SF175	PFAM:PF00850	PRINTS:PR01270	SUPFAM:SSF52768	UniParc:UPI0002763512	UniProt:K4ATA7
MapMan:12.3.2.1.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:3123209..3125706

Molecular Weight (calculated)

28514.1 Da

IEP (calculated)

6.338

GRAVY (calculated)

0.053

Length

265 amino acids

Sequence
(BLAST)

001: MQTFQESLLA AGAGISLVDS VVAASRVSKD PPVAFALIRP PGHHAVPKGA MGFCVFGNIA IAARYAQRMH GLQRVFIIDF DVHHGNGTND AFYEDPDIFF
101: LSTHQAGSYP GTGKIDQIGC GSGEGSTLNL PLPGGSGDTA MRTVFDEVIV PCAQRFKPDI ILVSAGYDAH LLDPLASLQF TTGTYYMLAS SIKQLAKDLC
201: GGRCVFFLEG GYNLSSLSNS VAESFRAFLG DRSLASELDD PSYLHEEPLK KVKQIIEKVK HIHSF

Best Arabidopsis Sequence Match ( AT4G33470.1 )
(BLAST)

001: MSMALIVRPF FVPGSAGISG SRNICKKNQW RKYLLKPSGS SINCSFSTEK NPLLPSIQQL ADARLIYSVS AALGHNKESH PECSARVPAI VNALEMNELT
101: PKFRGSQILE LANFKTATVE DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI AASRNSVDPP IGFALIRPPG
201: HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR
301: TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA
401: YLYDEPMRKV RDAIQRAKSI HCL

Arabidopsis Description

HDA14Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A178V1U6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.