Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G126600.1 | Wheat | mitochondrion, plastid, vacuole | 92.92 | 94.59 |
| TraesCS5A01G119300.2 | Wheat | mitochondrion | 92.7 | 94.37 |
| TraesCS5B01G121300.1 | Wheat | vacuole | 94.03 | 93.82 |
| Zm00001d042974_P001 | Maize | mitochondrion | 42.92 | 90.23 |
| Os12t0182700-01 | Rice | mitochondrion | 81.19 | 82.84 |
| EES01710 | Sorghum | plastid | 76.55 | 80.47 |
| Solyc01g009110.2.1 | Tomato | cytosol, endoplasmic reticulum, nucleus, plastid | 44.91 | 76.6 |
| GSMUA_AchrUn_... | Banana | cytosol | 67.7 | 69.07 |
| VIT_04s0044g01510.t01 | Wine grape | mitochondrion | 64.38 | 66.59 |
| KRH59585 | Soybean | plastid | 60.84 | 65.48 |
| CDX68980 | Canola | mitochondrion, plastid | 59.73 | 63.53 |
| AT4G33470.1 | Thale cress | plastid | 59.29 | 63.36 |
| CDX75356 | Canola | plastid | 59.51 | 63.29 |
| Bra011444.1-P | Field mustard | golgi, vacuole | 59.73 | 60.13 |
| VIT_13s0106g00170.t01 | Wine grape | cytosol, golgi, plastid | 24.11 | 32.34 |
| HORVU1Hr1G066760.1 | Barley | plastid | 25.44 | 26.26 |
| HORVU0Hr1G021740.4 | Barley | cytosol | 4.2 | 24.68 |
| HORVU1Hr1G074110.1 | Barley | cytosol | 19.25 | 22.36 |
| HORVU2Hr1G072570.5 | Barley | plastid | 11.95 | 19.22 |
| HORVU5Hr1G017550.9 | Barley | nucleus | 25.22 | 18.57 |
| HORVU4Hr1G044060.1 | Barley | cytosol | 15.93 | 17.73 |
| HORVU6Hr1G038010.6 | Barley | cytosol | 17.7 | 17.43 |
| HORVU2Hr1G032540.2 | Barley | plastid | 27.88 | 17.19 |
| HORVU6Hr1G038710.1 | Barley | cytosol | 17.7 | 15.44 |
| HORVU7Hr1G085870.2 | Barley | nucleus | 17.48 | 15.22 |
| HORVU5Hr1G077800.1 | Barley | cytosol | 15.49 | 14.46 |
| HORVU5Hr1G077760.1 | Barley | cytosol | 15.49 | 14.2 |
| HORVU0Hr1G021730.1 | Barley | cytosol | 3.76 | 14.17 |
| HORVU2Hr1G072600.1 | Barley | endoplasmic reticulum | 7.52 | 13.71 |
Protein Annotations
| MapMan:12.3.2.1.2 | Gene3D:3.40.800.20 | UniProt:A0A287QVS9 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004407 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006325 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016575 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0032041 |
| GO:GO:0042903 | GO:GO:0043014 | GO:GO:0043621 | GO:GO:0048487 | GO:GO:0051721 | GO:GO:0070932 |
| GO:GO:0090042 | EnsemblPlantsGene:HORVU5Hr1G037920 | EnsemblPlants:HORVU5Hr1G037920.1 | InterPro:His_deacetylse | InterPro:His_deacetylse_dom | InterPro:His_deacetylse_dom_sf |
| InterPro:IPR037138 | PFAM:PF00850 | PRINTS:PR01270 | PANTHER:PTHR10625 | PANTHER:PTHR10625:SF175 | SUPFAM:SSF52768 |
| UniParc:UPI000B46CFDB | InterPro:Ureohydrolase_dom_sf | : | : | : | : |
Description
Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A287QVS9]
Coordinates
chrchr5H:+:273913641..273941960
Molecular Weight (calculated)
48793.3 Da
IEP (calculated)
7.140
GRAVY (calculated)
-0.116
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MELLRIPPSL PMLGDNCLPR LSGRAFPLLR QYRVYGTHHP LTWSSLLTTG RNQNLNGGRF AQCAASHNGA SVSHVNGAPK DSSLPGSLLR DARILYCASP
101: AMGHNKEAHP ESNKRVPAIV DALEKLELTS KHRGSQILEI RNFYPASLDD VARVHSRTYI TGLEKAMSKA LDEGLIFIEG TGPTYATQTT FTESLLSAGA
201: GITLVDSVVA ASKLGPSPPL GFALIRPPGH HAVPDGPMGF CVFGNIAVAA RYAQHQHGLK RVMIIDFDVH HGNGTCDAFY DDPDIFFLST HQLGSYPGTG
301: KMNLIGQGSG EGTTLNLPLP GGSGDYSMRC AFDDVIAPSA QRFKPDIILV SAGYDAHALD PLAGLQFTTG TFYMLASSIK QLARELCGGR CVFFLEGGYN
401: LQSLSSSVAD TFRAFLDEPS LAAQFDNPAM LYEEPTRRIK EAIEKVRHLH SL
101: AMGHNKEAHP ESNKRVPAIV DALEKLELTS KHRGSQILEI RNFYPASLDD VARVHSRTYI TGLEKAMSKA LDEGLIFIEG TGPTYATQTT FTESLLSAGA
201: GITLVDSVVA ASKLGPSPPL GFALIRPPGH HAVPDGPMGF CVFGNIAVAA RYAQHQHGLK RVMIIDFDVH HGNGTCDAFY DDPDIFFLST HQLGSYPGTG
301: KMNLIGQGSG EGTTLNLPLP GGSGDYSMRC AFDDVIAPSA QRFKPDIILV SAGYDAHALD PLAGLQFTTG TFYMLASSIK QLARELCGGR CVFFLEGGYN
401: LQSLSSSVAD TFRAFLDEPS LAAQFDNPAM LYEEPTRRIK EAIEKVRHLH SL
001: MSMALIVRPF FVPGSAGISG SRNICKKNQW RKYLLKPSGS SINCSFSTEK NPLLPSIQQL ADARLIYSVS AALGHNKESH PECSARVPAI VNALEMNELT
101: PKFRGSQILE LANFKTATVE DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI AASRNSVDPP IGFALIRPPG
201: HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR
301: TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA
401: YLYDEPMRKV RDAIQRAKSI HCL
101: PKFRGSQILE LANFKTATVE DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI AASRNSVDPP IGFALIRPPG
201: HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR
301: TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA
401: YLYDEPMRKV RDAIQRAKSI HCL
Arabidopsis Description
HDA14Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A178V1U6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.