Factsheet for HORVU1Hr1G066760.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G329500.1	Wheat	cytosol	79.68	89.49
TraesCS1D01G317100.1	Wheat	mitochondrion	79.91	88.83
TraesCS1A01G317100.1	Wheat	mitochondrion	79.91	88.16
HORVU2Hr1G032540.2	Barley	plastid	76.71	45.84
Os07t0602200-01	Rice	cytosol, nucleus, plastid	70.78	44.6
Zm00001d006780_P011	Maize	cytosol	71.0	44.18
EER97493	Sorghum	plastid	70.78	44.1
Bra029339.1-P	Field mustard	cytosol	43.38	39.5
GSMUA_Achr4P03250_001	Banana	cytosol	56.16	37.05
VIT_17s0000g07280.t01	Wine grape	cytosol	53.42	36.22
Solyc03g115150.2.1	Tomato	cytosol	52.28	35.39
KRH56821	Soybean	nucleus	52.74	35.21
CDY42846	Canola	nucleus	41.32	35.01
Bra012984.1-P	Field mustard	nucleus	50.91	34.47
KRH03123	Soybean	cytosol	51.14	34.15
CDY23088	Canola	nucleus	50.23	34.0
CDY02173	Canola	nucleus	50.46	33.95
AT5G61060.2	Thale cress	cytosol	51.14	33.73
Bra035942.1-P	Field mustard	peroxisome	49.54	33.38
CDY16823	Canola	peroxisome	49.32	33.23
CDX87200	Canola	peroxisome	49.54	33.13
AT5G61070.1	Thale cress	cytosol	49.09	31.52
CDY47012	Canola	cytosol	29.0	29.67
HORVU1Hr1G074110.1	Barley	cytosol	23.06	25.96
HORVU5Hr1G037920.1	Barley	cytosol	26.26	25.44
HORVU0Hr1G021740.4	Barley	cytosol	4.11	23.38
HORVU5Hr1G017550.9	Barley	nucleus	32.42	23.13
HORVU4Hr1G044060.1	Barley	cytosol	18.49	19.95
HORVU6Hr1G038010.6	Barley	cytosol	20.32	19.39
HORVU5Hr1G077800.1	Barley	cytosol	21.23	19.21
HORVU5Hr1G077760.1	Barley	cytosol	21.23	18.86
HORVU2Hr1G072570.5	Barley	plastid	11.87	18.51
HORVU6Hr1G038710.1	Barley	cytosol	20.78	17.57
HORVU7Hr1G085870.2	Barley	nucleus	20.78	17.53
HORVU2Hr1G072600.1	Barley	endoplasmic reticulum	9.13	16.13
HORVU0Hr1G021730.1	Barley	cytosol	3.2	11.67

Protein Annotations

MapMan:12.3.2.1.2	Gene3D:3.40.800.20	UniProt:A0A287G132	GO:GO:0003674	GO:GO:0003824	GO:GO:0004407
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006325
GO:GO:0006351	GO:GO:0006355	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016575	GO:GO:0016787	GO:GO:0019538	GO:GO:0032041
GO:GO:0070932	EnsemblPlantsGene:HORVU1Hr1G066760	EnsemblPlants:HORVU1Hr1G066760.1	InterPro:His_deacetylse	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf
InterPro:IPR037138	PFAM:PF00850	PRINTS:PR01270	PANTHER:PTHR10625	PANTHER:PTHR10625:SF177	SUPFAM:SSF52768
UniParc:UPI000B47C9C9	InterPro:Ureohydrolase_dom_sf	SEG:seg	:	:	:

Description

Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A287G132]

Coordinates

chrchr1H:+:473791773..473802339

Molecular Weight (calculated)

48657.0 Da

IEP (calculated)

8.054

GRAVY (calculated)

-0.260

Length

438 amino acids

Sequence
(BLAST)

001: PRAATKGQDQ RCWPRPQSSR PGFRFHPEFY PFRLRSHLRR RKMAAAAGTA RKAGAAPRVG LLYDERMCAH APTTGTNQPE TPERLRAIWR KLAAEGVASR
101: CVGMRAKEAK EKYIVSVHVP KYINLIRNIS SKDSYKQEKA ARKFDSIYFN KGSSESAFLA AGSVIEVAEK VAAGELSSAI ALVRPPGHHA EYDKPMGFCL
201: FNNVAIAANY LLNERPDLGI NKILIVDWDV HHGNGTQDMF YSDPRVLFFS VHRYDFGSFY PYEVDASHCF IGDETGRGYN INVPWDHAKC GDADYVAAWD
301: HVLLPVAEAF DPDIILLSAG FDAALGDCMG DCCITPNGYA LLLTKLLGFA KGRIVMALEG GYNPESIANS VCACAKVLLG DKFALNSPEM QPFESTWRVI
401: QMVRDELKTY WPVLSSKLPE NVSLRSTPSY IEGYNEAP

Best Arabidopsis Sequence Match ( AT3G18520.2 )
(BLAST)

001: MVVETIERSC EGSKRRHVNG GDIAVPCSGE ECSNGDINVA PGVSAKRARV SREMTFEDIY GADALLNDDD DEDDDCDWEP VQAPMEFVKW CCVNCTMSNP
101: GDMVHCCICG EHKESGILRH GYLASPFFKD TGLIEVEEKY GGSSSATSST AVGFDERMLL HSEFEVKAQP HPERPDRLRA IAASLATAGV FPGRCLPINA
201: REITKQELQM VHTSEHVDAV DTTSQLLYSY FTSDTYANEY SARAARLAAG LCADLATDIF TGRVKNGFAL VRPPGHHAGV RHAMGFCLHN NAAVAALVAQ
301: AAGAKKVLIV DWDVHHGNGT QEIFEQNKSV LYISLHRHEG GNFYPGTGAA DEVGSNGGEG YCVNVPWSCG GVGDKDYIFA FQHVVLPIAS AFSPDFVIIS
401: AGFDAARGDP LGCCDVTPAG YSRMTQMLGD LCGGKMLVIL EGGYNLRSIS ASATAVIKVL LGENPENELP IATTPSVAGL QTVLDVLNIQ LEFWPSLAIS
501: YSKLLSELEA RLIENKSEKS DEKEGCSGSD MVEMGTKEAF VQLSLGSYDF KIKVILESIL PNPS

Arabidopsis Description

HDA15Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:F4J8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.