Factsheet for HORVU2Hr1G032540.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G185200.1	Wheat	cytosol, golgi	86.9	91.92
TraesCS2B01G204100.1	Wheat	cytosol	86.63	91.63
TraesCS2A01G177100.1	Wheat	cytosol	86.49	91.49
Os07t0602200-01	Rice	cytosol, nucleus, plastid	73.26	77.27
HORVU1Hr1G066760.1	Barley	plastid	45.84	76.71
EER97493	Sorghum	plastid	71.35	74.4
Zm00001d006780_P011	Maize	cytosol	70.67	73.58
GSMUA_Achr4P03250_001	Banana	cytosol	55.66	61.45
VIT_17s0000g07280.t01	Wine grape	cytosol	52.25	59.29
Bra012984.1-P	Field mustard	nucleus	50.75	57.5
CDY23088	Canola	nucleus	50.34	57.03
CDY02173	Canola	nucleus	49.8	56.07
KRH56821	Soybean	nucleus	49.93	55.79
Bra035942.1-P	Field mustard	peroxisome	49.11	55.38
CDY16823	Canola	peroxisome	48.98	55.23
Solyc03g115150.2.1	Tomato	cytosol	48.7	55.18
CDX87200	Canola	peroxisome	48.98	54.81
AT5G61060.2	Thale cress	cytosol	49.52	54.67
KRH03123	Soybean	cytosol	48.7	54.42
Bra029339.1-P	Field mustard	cytosol	32.33	49.27
CDY42846	Canola	nucleus	32.2	45.65
CDY47012	Canola	cytosol	23.74	40.65
AT5G61070.1	Thale cress	cytosol	36.02	38.71
HORVU0Hr1G021740.4	Barley	cytosol	3.27	31.17
HORVU5Hr1G037920.1	Barley	cytosol	17.19	27.88
HORVU1Hr1G074110.1	Barley	cytosol	14.6	27.51
HORVU5Hr1G017550.9	Barley	nucleus	21.69	25.9
HORVU6Hr1G038010.6	Barley	cytosol	13.92	22.22
HORVU7Hr1G085870.2	Barley	nucleus	15.42	21.77
HORVU5Hr1G077800.1	Barley	cytosol	14.05	21.28
HORVU6Hr1G038710.1	Barley	cytosol	14.87	21.04
HORVU4Hr1G044060.1	Barley	cytosol	11.6	20.94
HORVU5Hr1G077760.1	Barley	cytosol	14.05	20.89
HORVU2Hr1G072600.1	Barley	endoplasmic reticulum	6.55	19.35
HORVU2Hr1G072570.5	Barley	plastid	6.96	18.15
HORVU0Hr1G021730.1	Barley	cytosol	2.05	12.5

Protein Annotations

MapMan:12.3.2.1.2	Gene3D:3.40.800.20	UniProt:A0A287HLU7	GO:GO:0003674	GO:GO:0003824	GO:GO:0004407
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006325
GO:GO:0006351	GO:GO:0006355	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016575	GO:GO:0016787	GO:GO:0019538	GO:GO:0032041
GO:GO:0070932	EnsemblPlantsGene:HORVU2Hr1G032540	EnsemblPlants:HORVU2Hr1G032540.2	InterPro:His_deacetylse	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf
InterPro:IPR037138	PFAM:PF00850	PRINTS:PR01270	PANTHER:PTHR10625	PANTHER:PTHR10625:SF177	SUPFAM:SSF52768
UniParc:UPI000B479C95	InterPro:Ureohydrolase_dom_sf	SEG:seg	:	:	:

Description

Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A287HLU7]

Coordinates

chrchr2H:+:126675915..126730862

Molecular Weight (calculated)

79980.7 Da

IEP (calculated)

5.510

GRAVY (calculated)

-0.196

Length

733 amino acids

Sequence
(BLAST)

001: PVQSSPVVSP ISAPPRFPTR LAPFARPVSP PPAGGDRRRR MAAAGAATPM GAAPMVGLLY DDRMCAHATP DGEKHPENPE RLRAIRRKLD AEGIASRCVD
101: LKAKEAKEKY IASVHTPNHI KLIRDISSKD YDYRRNKTAS KFNSIYFNEG SSESAFLAAG SVIEVAEKVA AGELSSAIAL VRPPGHHAEH DEPMGFCLFN
201: NVAIAANYLL NERPDLGINK ILIVDWDVHH GNGTQKMFYS DPRVLFFSVH RFDYGSFYPC EVDAAHCFVG EGAGEGYNIN VPWEHGKCGD ADYVAAWDHV
301: LLPIAEAFDP DIILLSAGFD AAMGDPLGGC CITPDGYALL LTKLLGFAKG RIVMALEGGY NLKSIANSVC VCAKVLLGDN FTYNSPRMQP FESTWKVIQM
401: VRNELKAYWP VLSSKLPDNV PLRSTPSYIE PYASSGSESD VEDVSELPDA ISSANVIQVE DDVLSAHITM LKLDEDNLAT KNNSSDSVQA QDDGPVAAST
501: RIYDVTFTWR LTLSKVYVWY ASFGSNMWKP RFLCYIEGGK VNGMRISCFG SHDTSPPRGT MWRTVPHRLF FGRSSTPAWG TGGVAFLNPE INYNAESYVC
601: MYKITLEQFN DVLFQENSLV KDNSEDGKLE SPSSPLIGLS EIESVSSNKA LHLEPIKGSW YSNVLYLGEE DGLPILTMTC SSAAVARHKS GELPLAPPSE
701: TYSATLIKGL VEGKQLDANE AASYISSAAA RSL

Best Arabidopsis Sequence Match ( AT5G61060.1 )
(BLAST)

001: MAMAGESSGK KIGDCDGKVA GNRQRKVGLI YDETMCKHDT PDGEDHPECP DRIRVIWEKL QLAGVSQRCV VLGSSKAEDK HLQLVHTKDH VNLVKSISTK
101: QKDYRRNRIA SQLNSIYLNG GSSEAAYLAA GSVVKLAEKV AEGELDCGFA IVRPPGHHAE ADEAMGFCLF NNVAVAASFL LNERPDLGVK KILIVDWDVH
201: HGNGTQKMFW KDPRVLFFSV HRHEYGGFYP AGDDGDYNMV GEGPGEGFNI NVPWDQGRCG DADYLAAWDH ILIPVAREFN PDVIFLSAGF DAAINDPLGG
301: CCVTPYGYSV MLKKLMEFAQ GKIVLALEGG YNLDSIAKSS LACVQVLLED KQIQGPPEAY PFESTWRVIQ AVRKRLCTYW PSLADELSWK LINQKTPTPI
401: ILISSSDSET EDNAQGLLDQ MSKLSIENPQ GTLLENHQVE PASTSWRADL AKVDVWYASF GSNMWKPRFL CYIQGGQVDG LKKVCVGSMD KSPPKETVWE
501: TFPHRLFFGR ESSVGWGVGG VAFTNPLANL IDQTHMCLYR ITLEQFNDVL SQENGLNVDS DSPVFDLAAL QLVDNKGSIL EAPLNSWYGN VVCLGKERDI
601: PILTMTCTLS AVEKFKSGEI PIRPPAKAYA NTLIRGLVEG GRLSKEEAEA YIDKAVSKPL

Arabidopsis Description

HDA05Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:F4K1Z5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.