Factsheet for HORVU0Hr1G021730.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G362600.1	Wheat	plastid	80.83	27.32
TraesCS7D01G360500.1	Wheat	plastid	80.0	27.2
TraesCS7B01G266000.1	Wheat	plastid	80.0	27.2
Os06t0571100-01	Rice	plastid	68.33	23.3
EER89968	Sorghum	plastid	60.83	20.86
KRH05486	Soybean	cytosol	57.5	19.83
VIT_04s0008g00910.t01	Wine grape	plastid	58.33	19.5
Solyc08g065350.2.1	Tomato	cytosol	54.17	18.73
PGSC0003DMT400076991	Potato	cytosol	55.0	18.64
Zm00001d046348_P003	Maize	plastid	59.17	18.64
Bra009877.1-P	Field mustard	cytosol	51.67	17.77
AT5G26040.2	Thale cress	endoplasmic reticulum	53.33	16.54
CDX80555	Canola	cytosol, golgi, nucleus, plastid	50.83	16.31
GSMUA_Achr10P...	Banana	plastid	58.33	15.95
CDX88212	Canola	cytosol, golgi, nucleus, plastid	51.67	15.62
HORVU2Hr1G072570.5	Barley	plastid	12.5	5.34
HORVU4Hr1G044060.1	Barley	cytosol	15.0	4.43
HORVU6Hr1G038710.1	Barley	cytosol	18.33	4.25
HORVU7Hr1G085870.2	Barley	nucleus	17.5	4.05
HORVU6Hr1G038010.6	Barley	cytosol	15.0	3.92
HORVU5Hr1G037920.1	Barley	cytosol	14.17	3.76
HORVU5Hr1G077800.1	Barley	cytosol	14.17	3.51
HORVU5Hr1G077760.1	Barley	cytosol	14.17	3.45
HORVU1Hr1G066760.1	Barley	plastid	11.67	3.2
HORVU1Hr1G074110.1	Barley	cytosol	8.33	2.57
HORVU5Hr1G017550.9	Barley	nucleus	10.83	2.12
HORVU2Hr1G032540.2	Barley	plastid	12.5	2.05
HORVU2Hr1G072600.1	Barley	endoplasmic reticulum	0.83	0.4
HORVU0Hr1G021740.4	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU0Hr1G021730.1	EnsemblPlantsGene:HORVU0Hr1G021730	Gene3D:3.40.800.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:His_deacetylse_dom_sf	InterPro:IPR037138	InterPro:Ureohydrolase_dom_sf	PANTHER:PTHR43497	PANTHER:PTHR43497:SF2	SEG:seg
SUPFAM:SSF52768	UniParc:UPI000B4819A5	UniProt:A0A287E6Q7	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchrUn:+:113172785..113173536

Molecular Weight (calculated)

11325.7 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.010

Length

120 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX FDVPGSKAPV VYSTAYDIAF LGIEKMHPFD SSKWGRICRF LTKEGHLEKN RVVEPLEASQ EDLLVVHTEA YLNSLRSSFR
101: VAAIVEVPPL TLIPNWLLQQ

Best Arabidopsis Sequence Match ( AT5G26040.1 )
(BLAST)

001: MTHTRVISTW TELTRDLAIY LLFTFFAIKV FKFLFSCNRT SEISSFSMAT HPEALRRERI LNSKLYFDVP LSKVSIIYSS SYDISFMGIE KLHPFDSSKW
101: GRVCKFLVSD GFLEEKAIVE PLEASKIDLL VVHSENYLNS LKSSATVARI TEVAPVAFFP NFLVQQKVLY PFRKQVGGTI LAAKLATERG WAINIGGGFH
201: HCTAERGDLD AHQGNGHETD LGDDNRVYIL DMYNPEIYPF DYRARRFIDQ KVEVMSGTTT DEYLRKLDEA LEVASRNFQP ELVIYNAGTD ILDGDPLGLL
301: KISPDGITSR DEKVFRFARE KNIPLVMLTS GGYMKSSARV IADSIENLSR QGLIQTRPE

Arabidopsis Description

HDA2Histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q944K3]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.