Factsheet for Zm00001d046348_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89968	Sorghum	plastid	86.35	94.0
Os06t0571100-01	Rice	plastid	74.54	80.68
TraesCS7D01G360500.1	Wheat	plastid	72.44	78.19
TraesCS7B01G266000.1	Wheat	plastid	72.44	78.19
TraesCS7A01G362600.1	Wheat	plastid	72.18	77.46
Solyc08g065350.2.1	Tomato	cytosol	63.78	70.03
PGSC0003DMT400076991	Potato	cytosol	64.83	69.77
KRH05486	Soybean	cytosol	63.52	69.54
VIT_04s0008g00910.t01	Wine grape	plastid	65.35	69.36
Bra009877.1-P	Field mustard	cytosol	59.84	65.33
GSMUA_Achr10P...	Banana	plastid	69.55	60.36
AT5G26040.2	Thale cress	endoplasmic reticulum	60.89	59.95
HORVU0Hr1G021730.1	Barley	cytosol	18.64	59.17
CDX88212	Canola	cytosol, golgi, nucleus, plastid	60.37	57.93
CDX80555	Canola	cytosol, golgi, nucleus, plastid	55.38	56.42
Zm00001d014076_P001	Maize	cytosol, mitochondrion, nucleus	5.51	21.65
Zm00001d016381_P001	Maize	nucleus	22.83	21.32
Zm00001d050139_P001	Maize	nucleus	23.62	18.33
Zm00001d053595_P004	Maize	nucleus	23.88	17.6
Zm00001d046388_P001	Maize	nucleus	23.88	17.14
Zm00001d003813_P001	Maize	cytosol	19.95	17.0
Zm00001d042974_P001	Maize	mitochondrion	9.19	16.28
Zm00001d039202_P001	Maize	nucleus	6.56	15.06
Zm00001d018346_P001	Maize	mitochondrion	8.66	14.93
Zm00001d024221_P001	Maize	cytosol, nucleus, plastid, vacuole	7.61	14.8
Zm00001d018864_P002	Maize	nucleus	16.8	10.34
Zm00001d006780_P011	Maize	cytosol	18.64	10.09
Zm00001d010152_P002	Maize	cytosol	12.07	8.17
Zm00001d010162_P002	Maize	cytosol	12.07	8.17

Protein Annotations

MapMan:12.3.2.1.3	Gene3D:3.40.800.20	UniProt:A0A1D6P262	ProteinID:AQL04111.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004407	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006325	GO:GO:0006351	GO:GO:0006355	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016569	GO:GO:0016575	GO:GO:0016787
GO:GO:0019538	GO:GO:0032041	GO:GO:0070932	InterPro:His_deacetylse	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf
InterPro:IPR037138	PFAM:PF00850	PRINTS:PR01270	PANTHER:PTHR43497	PANTHER:PTHR43497:SF2	SUPFAM:SSF52768
UniParc:UPI00084405A3	InterPro:Ureohydrolase_dom_sf	EnsemblPlantsGene:Zm00001d046348	EnsemblPlants:Zm00001d046348_P003	EnsemblPlants:Zm00001d046348_T003	SEG:seg

Description

Histone deacetylase 11

Coordinates

chr9:-:82567121..82571140

Molecular Weight (calculated)

42367.1 Da

IEP (calculated)

6.924

GRAVY (calculated)

0.020

Length

381 amino acids

Sequence
(BLAST)

001: MASSSSSPAP ALAGEALRQK RILSSKLYLE VPSSKAPVVY SPAYDISFLG LEKLHPFESA KWGRICRYLT REGYLDKKQM VEPLEACKED LLVVHTEAYL
101: NSLKCSFRVS SIVEVPPVSL VPNWIVHRKL LHPFRKQVGG SILSAKLAFE RGWAINVGGG FHHCSADEGG GFCAYADISL CIQFAFVRLN ISSVLIIDLD
201: AHQGNGHEKD FANDGTYFNF LWILVLYICQ FDTSLSLTGR VYILDMYNAG IYPFDFTAKQ YIDQKVELVS GSKTDEYLEQ LDKALEICNS RFEPQLIVYN
301: AGTDILDGDP LGRLKVSPEG VVTRDEKVFR FAKDRNIPLL MLTSGEILLT RGYMKSSARV IADSIINLSN KNLIGLGSQL G

Best Arabidopsis Sequence Match ( AT5G26040.2 )
(BLAST)

001: MTHTRVISTW TELTRDLAIY LLFTFFAIKV FKFLFSCNRT SEISSFSMAT HPEALRRERI LNSKLYFDVP LSKVSIIYSS SYDISFMGIE KLHPFDSSKW
101: GRVCKFLVSD GFLEEKAIVE PLEASKIDLL VVHSENYLNS LKSSATVARI TEVAPVAFFP NFLVQQKVLY PFRKQVGGTI LAAKLATERG WAINIGGGFH
201: HCTAERGGGF CAFADISLCI HFAFLRLRIS RVMIIDLDAH QGNGHETDLG DDNRVYILDM YNPEIYPFDY RARRFIDQKV EVMSGTTTDE YLRKLDEALE
301: VASRNFQPEL VIYNAGTDIL DGDPLGLLKI SPDGITSRDE KVFRFAREKN IPLVMLTSGG YMKSSARVIA DSIENLSRQG LIQTRPE

Arabidopsis Description

HDA2Histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q944K3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.