Factsheet for Zm00001d042974_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g009110.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid	77.21	62.64
EES01710	Sorghum	plastid	95.35	47.67
TraesCS5A01G119300.2	Wheat	mitochondrion	90.7	43.92
TraesCS5D01G126600.1	Wheat	mitochondrion, plastid, vacuole	90.23	43.69
HORVU5Hr1G037920.1	Barley	cytosol	90.23	42.92
Os12t0182700-01	Rice	mitochondrion	88.37	42.89
TraesCS5B01G121300.1	Wheat	vacuole	89.77	42.6
GSMUA_AchrUn_...	Banana	cytosol	82.33	39.95
VIT_04s0044g01510.t01	Wine grape	mitochondrion	80.93	39.82
KRH59585	Soybean	plastid	77.21	39.52
CDX68980	Canola	mitochondrion, plastid	74.88	37.88
AT4G33470.1	Thale cress	plastid	74.42	37.83
CDX75356	Canola	plastid	73.95	37.41
Bra011444.1-P	Field mustard	golgi, vacuole	74.42	35.63
VIT_13s0106g00170.t01	Wine grape	cytosol, golgi, plastid	44.65	28.49
Zm00001d018864_P002	Maize	nucleus	36.28	12.6
Zm00001d006780_P011	Maize	cytosol	40.0	12.22
Zm00001d016381_P001	Maize	nucleus	21.86	11.52
Zm00001d003813_P001	Maize	cytosol	23.72	11.41
Zm00001d050139_P001	Maize	nucleus	25.12	11.0
Zm00001d046388_P001	Maize	nucleus	24.19	9.79
Zm00001d053595_P004	Maize	nucleus	22.33	9.28
Zm00001d046348_P003	Maize	plastid	16.28	9.19
Zm00001d010152_P002	Maize	cytosol	21.86	8.35
Zm00001d010162_P002	Maize	cytosol	21.86	8.35
Zm00001d024221_P001	Maize	cytosol, nucleus, plastid, vacuole	5.58	6.12
Zm00001d018346_P001	Maize	mitochondrion	4.65	4.52
Zm00001d039202_P001	Maize	nucleus	0.93	1.2
Zm00001d014076_P001	Maize	cytosol, mitochondrion, nucleus	0.0	0.0

Protein Annotations

MapMan:12.3.2.1.2	Gene3D:3.40.800.20	UniProt:A0A1D6N7T5	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0042903	GO:GO:0043014	GO:GO:0043621
GO:GO:0048487	GO:GO:0051721	GO:GO:0090042	InterPro:His_deacetylse	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf
InterPro:IPR037138	ProteinID:ONM36647.1	PFAM:PF00850	PRINTS:PR01270	PANTHER:PTHR10625	PANTHER:PTHR10625:SF175
SUPFAM:SSF52768	UniParc:UPI0002207DB1	InterPro:Ureohydrolase_dom_sf	EnsemblPlantsGene:Zm00001d042974	EnsemblPlants:Zm00001d042974_P001	EnsemblPlants:Zm00001d042974_T001
SEG:seg	:	:	:	:	:

Description

Histone deacetylase 10

Coordinates

chr3:-:185497140..185527206

Molecular Weight (calculated)

23275.5 Da

IEP (calculated)

5.016

GRAVY (calculated)

-0.044

Length

215 amino acids

Sequence
(BLAST)

001: MGFCVFGNIA VAARYAQHQH GLKRVMIIDF DVHHGNGTSD SFYDDPDIFF LSTHQLGSYP GTGKINEVGQ GDGEGTTLNL PLPGGAGDYA MRCAFDEVIA
101: PSAHRFKPDI ILVSAGYDAH ALDPLAGLQF TTGTFYMLAS SIKQVTKELC GGRCVFFLEG GYNLQSLSSS VADTFRAFLD EPSLAAQFDD PAILFEEPTR
201: KIKEAIEKAK SIHSL

Best Arabidopsis Sequence Match ( AT4G33470.1 )
(BLAST)

001: MSMALIVRPF FVPGSAGISG SRNICKKNQW RKYLLKPSGS SINCSFSTEK NPLLPSIQQL ADARLIYSVS AALGHNKESH PECSARVPAI VNALEMNELT
101: PKFRGSQILE LANFKTATVE DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI AASRNSVDPP IGFALIRPPG
201: HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR
301: TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA
401: YLYDEPMRKV RDAIQRAKSI HCL

Arabidopsis Description

HDA14Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A178V1U6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.