CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g009110.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid	50.71	80.38
Zm00001d042974_P001	Maize	mitochondrion	39.52	77.21
VIT_04s0044g01510.t01	Wine grape	mitochondrion	75.71	72.77
AT4G33470.1	Thale cress	plastid	67.62	67.14
CDX75356	Canola	plastid	66.9	66.12
CDX68980	Canola	mitochondrion, plastid	66.67	65.88
EES01710	Sorghum	plastid	65.0	63.49
Bra011444.1-P	Field mustard	golgi, vacuole	67.14	62.81
GSMUA_AchrUn_...	Banana	cytosol	65.71	62.3
TraesCS5A01G119300.2	Wheat	mitochondrion	65.71	62.16
TraesCS5D01G126600.1	Wheat	mitochondrion, plastid, vacuole	64.76	61.26
Os12t0182700-01	Rice	mitochondrion	64.52	61.17
HORVU5Hr1G037920.1	Barley	cytosol	65.48	60.84
TraesCS5B01G121300.1	Wheat	vacuole	65.48	60.71
KRH56687	Soybean	nucleus	25.95	26.14
KRH26679	Soybean	cytosol	23.33	25.72
KRH03799	Soybean	nucleus	27.14	20.99
KRH54336	Soybean	cytosol, nucleus, plastid	7.38	19.38
KRH03123	Soybean	cytosol	29.05	18.6
KRH56821	Soybean	nucleus	28.81	18.45
KRH63610	Soybean	cytosol	8.57	18.27
KRH63609	Soybean	cytosol	20.0	18.06
KRH57122	Soybean	nucleus	19.29	17.02
KRH05486	Soybean	cytosol	14.05	16.95
KRH03236	Soybean	nucleus	19.05	16.95
KRH30495	Soybean	cytosol	16.43	16.08
KRH25183	Soybean	cytosol	16.43	16.08
KRH60609	Soybean	nucleus	18.81	15.9
KRH51318	Soybean	nucleus	18.57	15.69
KRH27562	Soybean	nucleus	18.57	15.69
KRH77972	Soybean	nucleus	18.33	15.49
KRH54335	Soybean	cytosol, nucleus, plastid	8.33	14.96
KRH16462	Soybean	nucleus	0.95	5.13

Protein Annotations

EntrezGene:100788664	MapMan:12.3.2.1.2	Gene3D:3.40.800.20	EMBL:ACUP02003333	EnsemblPlantsGene:GLYMA_05G192600	GO:GO:0003674
GO:GO:0003824	GO:GO:0004407	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006325
GO:GO:0006351	GO:GO:0006355	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016043	GO:GO:0016569	GO:GO:0016575
GO:GO:0016787	GO:GO:0019538	GO:GO:0032041	GO:GO:0042903	GO:GO:0043014	GO:GO:0043621
GO:GO:0048487	GO:GO:0051721	GO:GO:0070932	InterPro:His_deacetylse	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf
InterPro:IPR037138	UniProt:K7KR69	EnsemblPlants:KRH59585	ProteinID:KRH59585	ProteinID:KRH59585.1	PFAM:PF00850
PRINTS:PR01270	PANTHER:PTHR10625	PANTHER:PTHR10625:SF175	SUPFAM:SSF52768	UniParc:UPI0002960A7D	InterPro:Ureohydrolase_dom_sf

Description

hypothetical protein

Coordinates

chr5:-:37781951..37787818

Molecular Weight (calculated)

45548.1 Da

IEP (calculated)

6.554

GRAVY (calculated)

-0.049

Length

420 amino acids

Sequence
(BLAST)

001: MHLLKFPRSP SSFASSGNAF FLVGHHVLDI RVFRKNQRCF RASISCSAVR NGSIEQLSDA RLIYSVAPSM GHNQESHPES HFRVPAIVNA LEEMQLTSKF
101: RGPEVIELQH FEPASVDDIA SVHARAYVSG LEKVMDQAVE KGLIFLDGSG PTYATATTFQ ESIVAAGAGL ALVDSVVACS KIKGDAPTGF ALIRPPGHHA
201: VPQGPMGFCI FGNVAIAARY SQRVHGLKRV FIIDFDVHHG NGTNDAFYDD PDVFFLSFHQ DGSYPGTGKF DEVGSGDGEG TTLNLPLPGG SGDTAIRTVF
301: DEVIVPCAQR FKPDIILVSA GYDGHVLDPL ANLQYTTGTY YMLASSIKQL AKDLCGGRCV FFLEGGYNLK SLSYSVADTF RALLGDRSLA SEFDNPNILY
401: EEPSTKVKQA IQKIKHIHSL

Best Arabidopsis Sequence Match ( AT4G33470.1 )
(BLAST)

001: MSMALIVRPF FVPGSAGISG SRNICKKNQW RKYLLKPSGS SINCSFSTEK NPLLPSIQQL ADARLIYSVS AALGHNKESH PECSARVPAI VNALEMNELT
101: PKFRGSQILE LANFKTATVE DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI AASRNSVDPP IGFALIRPPG
201: HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR
301: TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA
401: YLYDEPMRKV RDAIQRAKSI HCL

Arabidopsis Description

HDA14Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A178V1U6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.