CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54335	Soybean	cytosol, nucleus, plastid	68.53	57.69
KRH63609	Soybean	cytosol	70.56	29.89
KRH03236	Soybean	nucleus	62.94	26.27
KRH57122	Soybean	nucleus	63.45	26.26
KRH51318	Soybean	nucleus	52.28	20.72
KRH60609	Soybean	nucleus	52.28	20.72
KRH25183	Soybean	cytosol	44.67	20.51
KRH77972	Soybean	nucleus	51.27	20.32
KRH30495	Soybean	cytosol	44.16	20.28
KRH27562	Soybean	nucleus	50.76	20.12
KRH05486	Soybean	cytosol	23.35	13.22
KRH59585	Soybean	plastid	18.27	8.57
KRH26679	Soybean	cytosol	15.23	7.87
KRH56687	Soybean	nucleus	13.2	6.24
KRH03799	Soybean	nucleus	15.23	5.52
KRH03123	Soybean	cytosol	17.77	5.34
KRH56821	Soybean	nucleus	17.26	5.18
KRH54336	Soybean	cytosol, nucleus, plastid	1.52	1.88
KRH16462	Soybean	nucleus	0.51	1.28

Protein Annotations

Gene3D:3.40.800.20	MapMan:35.1	EMBL:ACUP02002703	EnsemblPlantsGene:GLYMA_04G187100	GO:GO:0003674	GO:GO:0003824
GO:GO:0004407	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0016575	GO:GO:0016787	GO:GO:0019538	InterPro:His_deacetylse	InterPro:His_deacetylse_1	InterPro:His_deacetylse_dom
InterPro:His_deacetylse_dom_sf	InterPro:IPR037138	UniProt:K7KL00	EnsemblPlants:KRH63610	ProteinID:KRH63610	ProteinID:KRH63610.1
PFAM:PF00850	PRINTS:PR01271	PANTHER:PTHR10625	PANTHER:PTHR10625:SF144	SUPFAM:SSF52768	UniParc:UPI000296B896
InterPro:Ureohydrolase_dom_sf	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:45741598..45742775

Molecular Weight (calculated)

22259.6 Da

IEP (calculated)

6.780

GRAVY (calculated)

-0.114

Length

197 amino acids

Sequence
(BLAST)

001: MATRERAEIE NGVSLPSVGM DANKRRVTYF YKPNIDAHYH GEEYPMNPFR VDITHNLIVH YGLHRLMQIN RPFLADKVDI ARFHSDDYVE FLSTVSPQIL
101: AENFDSNYCQ LKRFNIGGDF PILNGLFDFC RVSAGGSIGA AVCLNCSNAD ITINWAGGWH HAKKTKASGF CYVNDIVLGI LELLKVHRVL EFCDFGP

Best Arabidopsis Sequence Match ( AT3G44680.1 )
(BLAST)

001: MRSKDKISYF YDGDVGSVYF GPNHPMKPHR LCMTHHLILA YGLHSKMEVY RPHKAYPIEM AQFHSPDYVE FLQRINPENQ NLFPNEMARY NLGEDCPVFE
101: DLFEFCQLYA GGTIDAARRL NNKLCDIAIN WAGGLHHAKK CDASGFCYIN DLVLGILELL KHHPRVLYID IDVHHGDGVE EAFYFTDRVM TVSFHKFGDK
201: FFPGTGDVKE IGEREGKFYA INVPLKDGID DSSFNRLFRT IISKVVEIYQ PGAIVLQCGA DSLARDRLGC FNLSIDGHAE CVKFVKKFNL PLLVTGGGGY
301: TKENVARCWT VETGILLDTE LPNEIPENDY IKYFAPDFSL KIPGGHIENL NTKSYISSIK VQILENLRYI QHAPSVQMQE VPPDFYIPDF DEDEQNPDVR
401: ADQRSRDKQI QRDDEYFDGD NDNDAS

Arabidopsis Description

HDA9Histone deacetylase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.