Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
- plastid 2
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75356 | Canola | plastid | 91.54 | 96.71 |
| AT4G33470.1 | Thale cress | plastid | 81.07 | 86.05 |
| Solyc01g009110.2.1 | Tomato | cytosol, endoplasmic reticulum, nucleus, plastid | 46.1 | 78.11 |
| Zm00001d042974_P001 | Maize | mitochondrion | 35.63 | 74.42 |
| KRH59585 | Soybean | plastid | 62.81 | 67.14 |
| VIT_04s0044g01510.t01 | Wine grape | mitochondrion | 65.03 | 66.82 |
| EES01710 | Sorghum | plastid | 60.58 | 63.26 |
| Os12t0182700-01 | Rice | mitochondrion | 60.58 | 61.4 |
| TraesCS5A01G119300.2 | Wheat | mitochondrion | 59.69 | 60.36 |
| TraesCS5D01G126600.1 | Wheat | mitochondrion, plastid, vacuole | 59.24 | 59.91 |
| HORVU5Hr1G037920.1 | Barley | cytosol | 60.13 | 59.73 |
| TraesCS5B01G121300.1 | Wheat | vacuole | 59.91 | 59.38 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.35 | 59.14 |
| Bra001708.1-P | Field mustard | nucleus | 20.49 | 22.06 |
| Bra031628.1-P | Field mustard | cytosol | 18.71 | 21.76 |
| Bra029339.1-P | Field mustard | cytosol | 23.16 | 21.62 |
| Bra022329.1-P | Field mustard | nucleus | 25.17 | 19.82 |
| Bra035942.1-P | Field mustard | peroxisome | 24.94 | 17.23 |
| Bra012984.1-P | Field mustard | nucleus | 24.28 | 16.85 |
| Bra018073.1-P | Field mustard | cytosol | 14.92 | 16.79 |
| Bra019424.1-P | Field mustard | cytosol | 15.59 | 16.43 |
| Bra035858.1-P | Field mustard | nucleus | 16.93 | 16.17 |
| Bra019516.1-P | Field mustard | cytosol | 14.25 | 15.96 |
| Bra040131.1-P | Field mustard | nucleus | 17.37 | 15.54 |
| Bra009877.1-P | Field mustard | cytosol | 11.8 | 15.19 |
| Bra018072.1-P | Field mustard | cytosol | 13.36 | 13.57 |
| Bra038607.1-P | Field mustard | cytosol | 16.7 | 13.16 |
Protein Annotations
| MapMan:12.3.2.1.2 | Gene3D:3.40.800.20 | EnsemblPlantsGene:Bra011444 | EnsemblPlants:Bra011444.1 | EnsemblPlants:Bra011444.1-P | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004407 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006325 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016569 | GO:GO:0016575 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0032041 | GO:GO:0042903 | GO:GO:0043014 | GO:GO:0043621 |
| GO:GO:0048487 | GO:GO:0051721 | GO:GO:0070932 | GO:GO:0090042 | InterPro:His_deacetylse | InterPro:His_deacetylse_dom |
| InterPro:His_deacetylse_dom_sf | InterPro:IPR037138 | UniProt:M4D4P0 | PFAM:PF00850 | PRINTS:PR01270 | PANTHER:PTHR10625 |
| PANTHER:PTHR10625:SF175 | SUPFAM:SSF52768 | SignalP:SignalP-TM | UniParc:UPI0002545CAF | InterPro:Ureohydrolase_dom_sf | : |
Description
AT4G33470 (E=2e-210) hda14, ATHDA14 | hda14 (histone deacetylase 14); histone deacetylase
Coordinates
chrA01:+:2147742..2150790
Molecular Weight (calculated)
48505.0 Da
IEP (calculated)
6.272
GRAVY (calculated)
0.021
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFCLLLIYV STKGLMSFPC SQSFSVLEVT FLLFLGSGEV SGIRGFNLRN GLSLWRKHLV KHNKGAYICC SFSTEKDPLL PSVQQLTDAR VIYSVSAALG
101: HNKDSHPECS ARVPAIVTAL EKNELTRKFR GSEILELANF KNATIEDIAN VHEKAYVLGL EKAMGEASDS GLIFIEGSGP TYATSTTFQD SLIAAGAGMA
201: LVDSVVTASR NSFDPPTGFA LIRPPGHHAV PKGPMGFCVF GNVAIAARHA QRAHGLTRVF IIDFDVHHGN GTNDAFSEDP DIFFLSTHQD GSYPGTGKMS
301: DIGKGKGEGT TLNLPLPGGS GDIAMRTAFE EIIVPCVQRF KPDLILVSAG YDAHVLDPLA NLQFTTGTYY SLAKDIKQLA KEVCGGRCVF FLEGGYNLES
401: LSASVADSFR ALLGEESLAS EFDNPAYLYD EPMRKVRDAI ERAKSIHCL
101: HNKDSHPECS ARVPAIVTAL EKNELTRKFR GSEILELANF KNATIEDIAN VHEKAYVLGL EKAMGEASDS GLIFIEGSGP TYATSTTFQD SLIAAGAGMA
201: LVDSVVTASR NSFDPPTGFA LIRPPGHHAV PKGPMGFCVF GNVAIAARHA QRAHGLTRVF IIDFDVHHGN GTNDAFSEDP DIFFLSTHQD GSYPGTGKMS
301: DIGKGKGEGT TLNLPLPGGS GDIAMRTAFE EIIVPCVQRF KPDLILVSAG YDAHVLDPLA NLQFTTGTYY SLAKDIKQLA KEVCGGRCVF FLEGGYNLES
401: LSASVADSFR ALLGEESLAS EFDNPAYLYD EPMRKVRDAI ERAKSIHCL
001: MSMALIVRPF FVPGSAGISG SRNICKKNQW RKYLLKPSGS SINCSFSTEK NPLLPSIQQL ADARLIYSVS AALGHNKESH PECSARVPAI VNALEMNELT
101: PKFRGSQILE LANFKTATVE DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI AASRNSVDPP IGFALIRPPG
201: HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR
301: TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA
401: YLYDEPMRKV RDAIQRAKSI HCL
101: PKFRGSQILE LANFKTATVE DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI AASRNSVDPP IGFALIRPPG
201: HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR
301: TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA
401: YLYDEPMRKV RDAIQRAKSI HCL
Arabidopsis Description
HDA14Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A178V1U6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.