Factsheet for GSMUA_AchrUn_randomP00520_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042974_P001	Maize	mitochondrion	39.95	82.33
Solyc01g009110.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid	46.73	78.11
TraesCS5A01G119300.2	Wheat	mitochondrion	69.53	69.37
TraesCS5D01G126600.1	Wheat	mitochondrion, plastid, vacuole	69.3	69.14
EES01710	Sorghum	plastid	66.59	68.6
TraesCS5B01G121300.1	Wheat	vacuole	69.53	67.99
Os12t0182700-01	Rice	mitochondrion	67.72	67.72
HORVU5Hr1G037920.1	Barley	cytosol	69.07	67.7
VIT_04s0044g01510.t01	Wine grape	mitochondrion	65.01	65.9
KRH59585	Soybean	plastid	62.3	65.71
AT4G33470.1	Thale cress	plastid	60.95	63.83
CDX68980	Canola	mitochondrion, plastid	60.05	62.59
CDX75356	Canola	plastid	59.59	62.12
Bra011444.1-P	Field mustard	golgi, vacuole	59.14	58.35
VIT_13s0106g00170.t01	Wine grape	cytosol, golgi, plastid	24.83	32.64
GSMUA_Achr6P19520_001	Banana	cytosol	21.9	25.13
GSMUA_Achr2P06520_001	Banana	cytosol	16.03	19.51
GSMUA_Achr8P20260_001	Banana	nucleus	27.31	19.12
GSMUA_Achr4P03250_001	Banana	cytosol	27.31	18.22
GSMUA_AchrUn_...	Banana	mitochondrion	14.45	17.68
GSMUA_Achr1P14440_001	Banana	cytosol	16.03	17.07
GSMUA_AchrUn_...	Banana	cytosol	14.9	16.75
GSMUA_Achr8P04190_001	Banana	cytosol, nucleus, plasma membrane	15.35	15.78
GSMUA_Achr6P17260_001	Banana	plastid	16.7	15.42
GSMUA_Achr5P06320_001	Banana	nucleus	14.9	14.22
GSMUA_Achr10P...	Banana	plastid	13.77	13.9
GSMUA_Achr2P19590_001	Banana	nucleus	14.0	13.63
GSMUA_Achr7P09050_001	Banana	cytosol	7.0	11.03
GSMUA_Achr7P09060_001	Banana	mitochondrion	0.68	5.77

Protein Annotations

MapMan:12.3.2.1.2	Gene3D:3.40.800.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0004407	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0006139	GO:GO:0006325	GO:GO:0006351	GO:GO:0006355	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016043	GO:GO:0016569	GO:GO:0016575	GO:GO:0016787	GO:GO:0019538	GO:GO:0032041
GO:GO:0042903	GO:GO:0043014	GO:GO:0043621	GO:GO:0048487	GO:GO:0051721	GO:GO:0070932
GO:GO:0090042	EnsemblPlantsGene:GSMUA_AchrUn_randomG00520_001	EnsemblPlants:GSMUA_AchrUn_randomP00520_001	EnsemblPlants:GSMUA_AchrUn_randomT00520_001	InterPro:His_deacetylse	InterPro:His_deacetylse_dom
InterPro:His_deacetylse_dom_sf	InterPro:IPR037138	UniProt:M0U564	PFAM:PF00850	PRINTS:PR01270	PANTHER:PTHR10625
SUPFAM:SSF52768	UniParc:UPI000295B7F7	InterPro:Ureohydrolase_dom_sf	:	:	:

Description

Histone deacetylase 14 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG00520_001]

Coordinates

chrchrUn_random:+:2259923..2272618

Molecular Weight (calculated)

48308.1 Da

IEP (calculated)

7.285

GRAVY (calculated)

-0.125

Length

443 amino acids

Sequence
(BLAST)

001: MSPLMELRAL PPPTLAGCML PSVRQHTHGL RIRLTFKSKD YLMFIQRRIM RHMSLNIRSS AENDSGIKDD MKAASSIKPF YDARILYSMA PAMGHNKESH
101: PESNKRVPAI IDALEKLELS PKYRYSEVFE VQNFRPATMD DIARVHARTY ITGLEKAMSK ATDEGIIFID GSGPTYATKT TFEEALIAAG AGISLVDSVV
201: EASMATRNPP IGFALVRPPG HHAVPKGPMG FCVFGNIAVA ARHAQHAHGL KKVLIIDFDV HHGNGTCDAF YDDPDVFFIS THQVGSYPGT GKIEQVGQGS
301: GEGTTLNLPL PGGSGDNSMR SVFDEVIVPC AQRFKPDIVL VSAGYDAHAL DPLAGLQFTT GTYYMLASSI KQLANELCGG RCVFFLEGGY NLQSLSSSVA
401: DTFRAFLGEP SLASQFDDPA MLYEEPLSRV KKVLQKAKHI HSL

Best Arabidopsis Sequence Match ( AT4G33470.1 )
(BLAST)

001: MSMALIVRPF FVPGSAGISG SRNICKKNQW RKYLLKPSGS SINCSFSTEK NPLLPSIQQL ADARLIYSVS AALGHNKESH PECSARVPAI VNALEMNELT
101: PKFRGSQILE LANFKTATVE DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI AASRNSVDPP IGFALIRPPG
201: HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR
301: TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA
401: YLYDEPMRKV RDAIQRAKSI HCL

Arabidopsis Description

HDA14Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A178V1U6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.