Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G185200.1 | Wheat | cytosol, golgi | 98.85 | 98.85 |
| TraesCS2A01G177100.1 | Wheat | cytosol | 97.55 | 97.55 |
| HORVU2Hr1G032540.2 | Barley | plastid | 91.63 | 86.63 |
| TraesCS1B01G329500.1 | Wheat | cytosol | 43.43 | 77.18 |
| Os07t0602200-01 | Rice | cytosol, nucleus, plastid | 77.06 | 76.83 |
| EER97493 | Sorghum | plastid | 74.6 | 73.54 |
| Zm00001d006780_P011 | Maize | cytosol | 73.3 | 72.16 |
| GSMUA_Achr4P03250_001 | Banana | cytosol | 57.72 | 60.24 |
| VIT_17s0000g07280.t01 | Wine grape | cytosol | 54.55 | 58.51 |
| Bra012984.1-P | Field mustard | nucleus | 51.8 | 55.49 |
| CDY23088 | Canola | nucleus | 51.66 | 55.33 |
| KRH56821 | Soybean | nucleus | 52.09 | 55.03 |
| CDY02173 | Canola | nucleus | 50.94 | 54.22 |
| Solyc03g115150.2.1 | Tomato | cytosol | 50.51 | 54.1 |
| Bra035942.1-P | Field mustard | peroxisome | 50.36 | 53.69 |
| KRH03123 | Soybean | cytosol | 50.79 | 53.66 |
| CDY16823 | Canola | peroxisome | 50.22 | 53.54 |
| AT5G61060.2 | Thale cress | cytosol | 51.08 | 53.31 |
| CDX87200 | Canola | peroxisome | 50.36 | 53.28 |
| Bra029339.1-P | Field mustard | cytosol | 33.48 | 48.23 |
| CDY42846 | Canola | nucleus | 32.61 | 43.71 |
| CDY47012 | Canola | cytosol | 24.96 | 40.42 |
| AT5G61070.1 | Thale cress | cytosol | 36.08 | 36.66 |
| TraesCS3B01G318000.1 | Wheat | cytoskeleton, cytosol, nucleus | 19.77 | 36.05 |
| TraesCS5B01G121300.1 | Wheat | vacuole | 17.32 | 26.49 |
| TraesCS1B01G284500.1 | Wheat | cytosol, nucleus, plastid | 15.01 | 26.46 |
| TraesCS5B01G072100.1 | Wheat | nucleus | 21.93 | 24.76 |
| TraesCS6B01G210200.1 | Wheat | cytosol | 14.72 | 22.27 |
| TraesCS2B01G309700.1 | Wheat | cytosol | 13.28 | 21.4 |
| TraesCS7B01G261800.1 | Wheat | nucleus | 16.02 | 21.39 |
| TraesCS6B01G212600.3 | Wheat | nucleus | 15.58 | 20.77 |
| TraesCS7B01G266000.1 | Wheat | plastid | 10.53 | 20.68 |
| TraesCS4B01G102600.1 | Wheat | cytosol, mitochondrion, nucleus | 13.13 | 19.32 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G204100.1 | EnsemblPlantsGene:TraesCS2B01G204100 | Gene3D:3.40.800.20 | InterPro:His_deacetylse | InterPro:His_deacetylse_dom | InterPro:His_deacetylse_dom_sf |
| InterPro:IPR037138 | InterPro:Ureohydrolase_dom_sf | PANTHER:PTHR10625 | PANTHER:PTHR10625:SF177 | PFAM:PF00850 | PRINTS:PR01270 |
| SEG:seg | SUPFAM:SSF52768 | MapMan:12.3.2.1.2 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:183654052..183662786
Molecular Weight (calculated)
74101.4 Da
IEP (calculated)
5.024
GRAVY (calculated)
-0.209
Length
693 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAGAATPV GAAPRVGLLY DDRMCAHATP DGEKHPENPE RLRAIRRKLD AEGVASRCVD MKAKEAKEKY IASVHTPNHI KLIRDISSKE YDYRRNKTAR
101: KFNSIYFNEG SSESAFLAAG SVIEVAEKVA AGELSSAIAL VRPPGHHAEH NEPMGFCLFN NVAIAANYLL NERPDLGINK ILIVDWDVHH GNGTQKMFYS
201: DSRVLFFSVH RFDYGSFYPC EGDASHCFIG EGAGEGYNIN VPWEHGKCSD ADYVAAWDHV LLPIAEAFDP DIILLSAGFD AAMGDPLGGC CITPDGYALL
301: LTKLLGFAKG RIVMALEGGY NLKSIANSVC ACTKVLLGDN FTYNSPRMQP FESTWRVIQM VXXXXXXXXX XXXXXXXDNV PLRSAPSYIE PYASSGSESD
401: VEDVSELPDA ISSVNVTQVV DDVLSKHITM LKLDEDNLVT KNTSSDSVQA QDDVPVVAST RIYDLPFTWR SALSKVYVWY ASFGSNMWKP RFLSYIEGGK
501: VDGMSISCFG SHDTSPPRGT MWKTVPHRLF FGRSSTPCWG TGGVAFLNPE TNYNDESYVC MYKITLEQFN DVLFQENRLV KDNSEDGKLE SPSSPLIGLS
601: EIESVSSNKA LHLEPIKDSW YSNVLHLGEE DGLPILTMTC PSTAVAQHKS GELPLAPPSE TYSATLIKGL VEGKQLDANE AANYISSAAA RSL
101: KFNSIYFNEG SSESAFLAAG SVIEVAEKVA AGELSSAIAL VRPPGHHAEH NEPMGFCLFN NVAIAANYLL NERPDLGINK ILIVDWDVHH GNGTQKMFYS
201: DSRVLFFSVH RFDYGSFYPC EGDASHCFIG EGAGEGYNIN VPWEHGKCSD ADYVAAWDHV LLPIAEAFDP DIILLSAGFD AAMGDPLGGC CITPDGYALL
301: LTKLLGFAKG RIVMALEGGY NLKSIANSVC ACTKVLLGDN FTYNSPRMQP FESTWRVIQM VXXXXXXXXX XXXXXXXDNV PLRSAPSYIE PYASSGSESD
401: VEDVSELPDA ISSVNVTQVV DDVLSKHITM LKLDEDNLVT KNTSSDSVQA QDDVPVVAST RIYDLPFTWR SALSKVYVWY ASFGSNMWKP RFLSYIEGGK
501: VDGMSISCFG SHDTSPPRGT MWKTVPHRLF FGRSSTPCWG TGGVAFLNPE TNYNDESYVC MYKITLEQFN DVLFQENRLV KDNSEDGKLE SPSSPLIGLS
601: EIESVSSNKA LHLEPIKDSW YSNVLHLGEE DGLPILTMTC PSTAVAQHKS GELPLAPPSE TYSATLIKGL VEGKQLDANE AANYISSAAA RSL
001: MAMAGESSGK KIGDCDGKVA GNRQRKVGLI YDETMCKHDT PDGEDHPECP DRIRVIWEKL QLAGVSQRCV VLGSSKAEDK HLQLVHTKDH VNLVKSISTK
101: QKDYRRNRIA SQLNSIYLNG GSSEAAYLAA GSVVKLAEKV AEGELDCGFA IVRPPGHHAE ADEAMGFCLF NNVAVAASFL LNERPDLGVK KILIVDWDVH
201: HGNGTQKMFW KDPRVLFFSV HRHEYGGFYP AGDDGDYNMV GEGPGEGFNI NVPWDQGRCG DADYLAAWDH ILIPVAREFN PDVIFLSAGF DAAINDPLGG
301: CCVTPYGYSV MLKKLMEFAQ GKIVLALEGG YNLDSIAKSS LACVQVLLED KQIQGPPEAY PFESTWRVIQ AVRKRLCTYW PSLADELSWK LINQKTPTPI
401: ILISSSDSET EDNAQGLLDQ MSKLSIENPQ GTLLENHQVE PASTSWRADL AKVDVWYASF GSNMWKPRFL CYIQGGQVDG LKKVCVGSMD KSPPKETVWE
501: TFPHRLFFGR ESSVGWGVGG VAFTNPLANL IDQTHMCLYR ITLEQFNDVL SQENGLNVDS DSPVFDLAAL QLVDNKGSIL EAPLNSWYGN VVCLGKERDI
601: PILTMTCTLS AVEKFKSGEI PIRPPAKAYA NTLIRGLVEG GRLSKEEAEA YIDKAVSKPL
101: QKDYRRNRIA SQLNSIYLNG GSSEAAYLAA GSVVKLAEKV AEGELDCGFA IVRPPGHHAE ADEAMGFCLF NNVAVAASFL LNERPDLGVK KILIVDWDVH
201: HGNGTQKMFW KDPRVLFFSV HRHEYGGFYP AGDDGDYNMV GEGPGEGFNI NVPWDQGRCG DADYLAAWDH ILIPVAREFN PDVIFLSAGF DAAINDPLGG
301: CCVTPYGYSV MLKKLMEFAQ GKIVLALEGG YNLDSIAKSS LACVQVLLED KQIQGPPEAY PFESTWRVIQ AVRKRLCTYW PSLADELSWK LINQKTPTPI
401: ILISSSDSET EDNAQGLLDQ MSKLSIENPQ GTLLENHQVE PASTSWRADL AKVDVWYASF GSNMWKPRFL CYIQGGQVDG LKKVCVGSMD KSPPKETVWE
501: TFPHRLFFGR ESSVGWGVGG VAFTNPLANL IDQTHMCLYR ITLEQFNDVL SQENGLNVDS DSPVFDLAAL QLVDNKGSIL EAPLNSWYGN VVCLGKERDI
601: PILTMTCTLS AVEKFKSGEI PIRPPAKAYA NTLIRGLVEG GRLSKEEAEA YIDKAVSKPL
Arabidopsis Description
HDA05Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:F4K1Z5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.