Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G422300.1 | Wheat | cytosol | 52.11 | 60.55 |
| TraesCS1B01G329500.1 | Wheat | cytosol | 34.21 | 33.33 |
| TraesCS1B01G284500.1 | Wheat | cytosol, nucleus, plastid | 23.42 | 22.65 |
| TraesCS5B01G121300.1 | Wheat | vacuole | 25.26 | 21.19 |
| TraesCS2B01G204100.1 | Wheat | cytosol | 36.05 | 19.77 |
| TraesCS5B01G072100.1 | Wheat | nucleus | 28.42 | 17.59 |
| TraesCS6B01G210200.1 | Wheat | cytosol | 20.53 | 17.03 |
| TraesCS4B01G102600.1 | Wheat | cytosol, mitochondrion, nucleus | 20.53 | 16.56 |
| TraesCS7B01G266000.1 | Wheat | plastid | 14.74 | 15.86 |
| TraesCS2B01G309700.1 | Wheat | cytosol | 17.63 | 15.58 |
| TraesCS7B01G261800.1 | Wheat | nucleus | 21.05 | 15.41 |
| TraesCS6B01G212600.3 | Wheat | nucleus | 21.05 | 15.38 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G318000.1 | EnsemblPlantsGene:TraesCS3B01G318000 | Gene3D:3.40.800.20 | InterPro:His_deacetylse | InterPro:His_deacetylse_dom | InterPro:His_deacetylse_dom_sf |
| InterPro:IPR037138 | InterPro:Ureohydrolase_dom_sf | PANTHER:PTHR10625 | PANTHER:PTHR10625:SF177 | PFAM:PF00850 | PRINTS:PR01270 |
| SEG:seg | SUPFAM:SSF52768 | TIGR:cd09992 | MapMan:12.3.2.1.2 | : | : |
Description
No Description!
Coordinates
chr3B:-:512513775..512515566
Molecular Weight (calculated)
41427.0 Da
IEP (calculated)
6.225
GRAVY (calculated)
-0.226
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MKWHQDGDKD HSAETASRIS EIMKKLDEDG VLDRIAREPF VMANRRLVLA VHHNLDYLAF VNSLPKSQKE LELKFSQFAG ISLFSSKGTP QAVFAAAGAV
101: IRGCELVVGG YYNQAFAVVR PPGHHADKSW AEGFCYFNNI AIGARHLLDH YRLKRILVVD FDVHHGNGTQ EIFYDNKHVL FFSSHCGDLT YPKSNSKASH
201: IGEGAGEGYN INFPLAEGFN EDDLLYAVNK ILLPVATKFD PEVVLVSAGF DAGIDDMGGC NVSSKGFGTV VRKLLCLAGG KMVLALEGGY NLKHLPTHVS
301: HSIRAILGDE DAFFPDYDQT DHRPSESTIS MADNLQLKLS PYWDVFVEKP PGPTPEGETP PRPGAVGGDP SGALGSHSSS
101: IRGCELVVGG YYNQAFAVVR PPGHHADKSW AEGFCYFNNI AIGARHLLDH YRLKRILVVD FDVHHGNGTQ EIFYDNKHVL FFSSHCGDLT YPKSNSKASH
201: IGEGAGEGYN INFPLAEGFN EDDLLYAVNK ILLPVATKFD PEVVLVSAGF DAGIDDMGGC NVSSKGFGTV VRKLLCLAGG KMVLALEGGY NLKHLPTHVS
301: HSIRAILGDE DAFFPDYDQT DHRPSESTIS MADNLQLKLS PYWDVFVEKP PGPTPEGETP PRPGAVGGDP SGALGSHSSS
001: MSMALIVRPF FVPGSAGISG SRNICKKNQW RKYLLKPSGS SINCSFSTEK NPLLPSIQQL ADARLIYSVS AALGHNKESH PECSARVPAI VNALEMNELT
101: PKFRGSQILE LANFKTATVE DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI AASRNSVDPP IGFALIRPPG
201: HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR
301: TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA
401: YLYDEPMRKV RDAIQRAKSI HCL
101: PKFRGSQILE LANFKTATVE DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI AASRNSVDPP IGFALIRPPG
201: HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR
301: TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA
401: YLYDEPMRKV RDAIQRAKSI HCL
Arabidopsis Description
HDA14Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A178V1U6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.