Factsheet for Os07t0602200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G177100.1	Wheat	cytosol	77.41	77.63
Zm00001d006780_P011	Maize	cytosol	78.56	77.56
EER97493	Sorghum	plastid	78.42	77.52
TraesCS2D01G185200.1	Wheat	cytosol, golgi	77.27	77.49
TraesCS1A01G317100.1	Wheat	mitochondrion	44.17	77.33
TraesCS1B01G329500.1	Wheat	cytosol	43.31	77.18
TraesCS2B01G204100.1	Wheat	cytosol	76.83	77.06
TraesCS1D01G317100.1	Wheat	mitochondrion	43.17	76.14
HORVU2Hr1G032540.2	Barley	plastid	77.27	73.26
HORVU1Hr1G066760.1	Barley	plastid	44.6	70.78
GSMUA_Achr4P03250_001	Banana	cytosol	60.14	62.95
VIT_17s0000g07280.t01	Wine grape	cytosol	56.4	60.68
KRH56821	Soybean	nucleus	54.39	57.62
Bra012984.1-P	Field mustard	nucleus	53.24	57.19
CDY23088	Canola	nucleus	52.95	56.88
Solyc03g115150.2.1	Tomato	cytosol	52.66	56.57
CDY02173	Canola	nucleus	52.81	56.37
KRH03123	Soybean	cytosol	52.81	55.95
AT5G61060.2	Thale cress	cytosol	53.24	55.72
Bra035942.1-P	Field mustard	peroxisome	52.09	55.69
CDY16823	Canola	peroxisome	51.94	55.54
CDX87200	Canola	peroxisome	52.09	55.27
Bra029339.1-P	Field mustard	cytosol	34.1	49.27
CDY42846	Canola	nucleus	34.24	46.03
CDY47012	Canola	cytosol	25.18	40.89
AT5G61070.1	Thale cress	cytosol	36.55	37.24
Os05t0440250-01	Rice	cytosol, nucleus, plastid	15.68	27.81
Os12t0182700-01	Rice	mitochondrion	17.7	27.77
Os07t0164100-01	Rice	nucleus	23.6	26.32
Os08t0344100-01	Rice	cytoskeleton, cytosol, nucleus	15.83	24.02
Os05t0440300-01	Rice	cytosol, nucleus, plastid	13.24	23.29
Os06t0583400-01	Rice	nucleus	16.98	22.78
Os11t0200000-01	Rice	cytosol	14.53	22.15
Os02t0215200-02	Rice	cytoskeleton, cytosol, nucleus	16.12	22.0
Os02t0214900-01	Rice	cytoskeleton, cytosol, nucleus	16.12	21.96
Os06t0571100-01	Rice	plastid	10.5	20.74
Os04t0409600-01	Rice	cytosol	4.46	16.49
Os05t0440100-02	Rice	cytosol	4.17	10.58
Os07t0164300-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

MapMan:12.3.2.1.2	Gene3D:3.40.800.20	EntrezGene:4343829	ProteinID:BAF22119.1	ProteinID:BAT02529.1	ProteinID:EEE67541.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004407	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006325	GO:GO:0006351	GO:GO:0006355	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016575
GO:GO:0016787	GO:GO:0019538	GO:GO:0032041	GO:GO:0070932	InterPro:His_deacetylse	InterPro:His_deacetylse_dom
InterPro:His_deacetylse_dom_sf	InterPro:IPR037138	EnsemblPlantsGene:Os07g0602200	EnsemblPlants:Os07t0602200-01	PFAM:PF00850	PRINTS:PR01270
PANTHER:PTHR10625	PANTHER:PTHR10625:SF177	UniProt:Q0D4V4	SUPFAM:SSF52768	UniParc:UPI0000E12BDB	InterPro:Ureohydrolase_dom_sf
RefSeq:XP_015647673.1	RefSeq:XP_015647674.1	SEG:seg	:	:	:

Description

Similar to HDA1. (Os07t0602200-01)

Coordinates

chr7:+:24592035..24598353

Molecular Weight (calculated)

76221.1 Da

IEP (calculated)

5.322

GRAVY (calculated)

-0.213

Length

695 amino acids

Sequence
(BLAST)

001: MAAATTAAAA ARVGLLYDER MCAHATPDGE EHPENPERLR AIWRKLSADG VASRCMIMKA KEAEDKYIAS VHSQNHIKLM RSISSKEYDS RRNKIARKFN
101: SIYFNKGSSE SAFLAAGSVI EVAEKVAAGE LSSAIALVRP PGHHAEHNEA MGFCLFNNVA IAADYLLNER TDLGIKKILI VDWDVHHGNG TQKMFYSDPR
201: VLFFSVHRFD YGSFYPAEGD ASYCFIGEGD GKGYNINVPW EHGKCGDADY IAAWDHVLLP VAEAFNPDIV LVSAGFDAAL GDPLGGCCIT PNGYALLLTK
301: LLGFAQGRIV MALEGGYNLR SIANSVSACA KVLLGDKFRF DTPDMQPFES SWRVIQAVRD ELKTFWPVLS NRLPENISLR SRPSQIELYS SGSDSEVEDL
401: PDAIASVNII QITYGIISES LSKLNLDEDK IATKTTSSNV MVEGPTDSVE PQNDGSAAVS TEGISSLSST WRSELSKVYV WYASFGSNMW TPRFLCYIQG
501: GKAEGMNIPC FGSHDTSPPR GSMWKTVPHR LFFGRSSTPC WGTGGVAFLN PEINHTENSY VCMYKITLEQ FNDVLFQENR LVKENGESGK TESPDSPLIG
601: LSEIEFVSRN KGVHLAPIKD SWYSNVLYLG EEDNLPILTM TCPSSDVERC RSGELPLCPP SKTYSATLIR GLMEGKHLDA DAAASYINTA ATRGL

Best Arabidopsis Sequence Match ( AT5G61060.1 )
(BLAST)

001: MAMAGESSGK KIGDCDGKVA GNRQRKVGLI YDETMCKHDT PDGEDHPECP DRIRVIWEKL QLAGVSQRCV VLGSSKAEDK HLQLVHTKDH VNLVKSISTK
101: QKDYRRNRIA SQLNSIYLNG GSSEAAYLAA GSVVKLAEKV AEGELDCGFA IVRPPGHHAE ADEAMGFCLF NNVAVAASFL LNERPDLGVK KILIVDWDVH
201: HGNGTQKMFW KDPRVLFFSV HRHEYGGFYP AGDDGDYNMV GEGPGEGFNI NVPWDQGRCG DADYLAAWDH ILIPVAREFN PDVIFLSAGF DAAINDPLGG
301: CCVTPYGYSV MLKKLMEFAQ GKIVLALEGG YNLDSIAKSS LACVQVLLED KQIQGPPEAY PFESTWRVIQ AVRKRLCTYW PSLADELSWK LINQKTPTPI
401: ILISSSDSET EDNAQGLLDQ MSKLSIENPQ GTLLENHQVE PASTSWRADL AKVDVWYASF GSNMWKPRFL CYIQGGQVDG LKKVCVGSMD KSPPKETVWE
501: TFPHRLFFGR ESSVGWGVGG VAFTNPLANL IDQTHMCLYR ITLEQFNDVL SQENGLNVDS DSPVFDLAAL QLVDNKGSIL EAPLNSWYGN VVCLGKERDI
601: PILTMTCTLS AVEKFKSGEI PIRPPAKAYA NTLIRGLVEG GRLSKEEAEA YIDKAVSKPL

Arabidopsis Description

HDA05Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:F4K1Z5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.