Factsheet for Os11t0200000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G044060.1	Barley	cytosol	54.17	60.84
TraesCS4A01G213200.1	Wheat	cytosol, mitochondrion, nucleus	59.65	57.75
TraesCS4D01G100000.1	Wheat	cytosol	59.43	57.54
TraesCS4B01G102600.1	Wheat	cytosol, mitochondrion, nucleus	58.77	56.9
Os08t0344100-01	Rice	cytoskeleton, cytosol, nucleus	44.74	44.54
Os02t0215200-02	Rice	cytoskeleton, cytosol, nucleus	46.05	41.26
Os02t0214900-01	Rice	cytoskeleton, cytosol, nucleus	46.05	41.18
Os06t0583400-01	Rice	nucleus	46.71	41.12
Os04t0409600-01	Rice	cytosol	12.28	29.79
Os06t0571100-01	Rice	plastid	19.3	25.0
Os05t0440250-01	Rice	cytosol, nucleus, plastid	18.86	21.94
Os05t0440300-01	Rice	cytosol, nucleus, plastid	16.01	18.48
Os12t0182700-01	Rice	mitochondrion	14.91	15.35
Os07t0602200-01	Rice	cytosol, nucleus, plastid	22.15	14.53
Os07t0164100-01	Rice	nucleus	19.08	13.96
Os05t0440100-02	Rice	cytosol	0.88	1.46
Os07t0164300-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

MapMan:12.3.2.1.1	Gene3D:3.40.800.20	EntrezGene:4350006	ProteinID:ABA91949.1	ProteinID:BAF27803.1	ProteinID:BAT13073.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004407	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006325	GO:GO:0006351	GO:GO:0006355
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0016575	GO:GO:0016787	GO:GO:0019538	GO:GO:0032041	GO:GO:0046872	GO:GO:0070932
InterPro:His_deacetylse	InterPro:His_deacetylse_1	InterPro:His_deacetylse_dom	InterPro:His_deacetylse_dom_sf	InterPro:IPR037138	EnsemblPlantsGene:Os11g0200000
EnsemblPlants:Os11t0200000-01	PFAM:PF00850	PIRSF:PIRSF037913	PRINTS:PR01270	PRINTS:PR01271	PANTHER:PTHR10625
PANTHER:PTHR10625:SF126	UniProt:Q2R9B1	SUPFAM:SSF52768	UniParc:UPI000068248D	InterPro:Ureohydrolase_dom_sf	RefSeq:XP_015616602.1
SEG:seg	:	:	:	:	:

Description

Histone deacetylase family protein. (Os11t0200000-01)

Coordinates

chr11:-:5027829..5029584

Molecular Weight (calculated)

50131.4 Da

IEP (calculated)

7.031

GRAVY (calculated)

-0.343

Length

456 amino acids

Sequence
(BLAST)

001: MATGGNSLPS PSCADDKKRR VCYYYDPGIA HIKFSDDHVM VPARVAMAHS LVGVYGMLGD MRRLRTRPAT EAEIRRFHSP EYVDLLRDLT PESYFNDAAL
101: RQKAEDDHGI GGDDDCPAFD RLWKYCRGYA GGSFAAARAL VDGASDIAIN WSGGMHHASA CKATGFCYVN DIVLAINELL GTFRRVIYVD IDAHHGDGVQ
201: NAFLDSNRVM TLSFHRYGKI TPHKDFFPGS GAINEIGDGA GEHYSVNVPL DAGVRDDVYH TLFKPIVGKA MEVFQPEAIV LQCGADSLSG DRLGGMELSV
301: RGHAECVSFL RGFNLPLLLV GGGGYTINHV ASAWCYETAV AVGKERKLPD DIEIPSHGYE LMYKNQGNKL HYKTSTATAA RKRSSSTEVT KGKVLEHLSQ
401: VKRAPSVQFQ ERRGGDNAAG VGLYYERPPS LEDDEPAQRL HRLCFPGLTK RIRLND

Best Arabidopsis Sequence Match ( AT3G44680.1 )
(BLAST)

001: MRSKDKISYF YDGDVGSVYF GPNHPMKPHR LCMTHHLILA YGLHSKMEVY RPHKAYPIEM AQFHSPDYVE FLQRINPENQ NLFPNEMARY NLGEDCPVFE
101: DLFEFCQLYA GGTIDAARRL NNKLCDIAIN WAGGLHHAKK CDASGFCYIN DLVLGILELL KHHPRVLYID IDVHHGDGVE EAFYFTDRVM TVSFHKFGDK
201: FFPGTGDVKE IGEREGKFYA INVPLKDGID DSSFNRLFRT IISKVVEIYQ PGAIVLQCGA DSLARDRLGC FNLSIDGHAE CVKFVKKFNL PLLVTGGGGY
301: TKENVARCWT VETGILLDTE LPNEIPENDY IKYFAPDFSL KIPGGHIENL NTKSYISSIK VQILENLRYI QHAPSVQMQE VPPDFYIPDF DEDEQNPDVR
401: ADQRSRDKQI QRDDEYFDGD NDNDAS

Arabidopsis Description

HDA9Histone deacetylase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.