Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G389300.1 | Wheat | mitochondrion, plastid | 90.97 | 90.97 |
| TraesCS5B01G383400.1 | Wheat | mitochondrion | 82.94 | 84.35 |
| HORVU5Hr1G093860.2 | Barley | plastid | 80.94 | 79.61 |
| EER93488 | Sorghum | plastid | 59.87 | 57.56 |
| Os03t0739700-01 | Rice | plastid | 59.87 | 52.03 |
| VIT_18s0001g11680.t01 | Wine grape | mitochondrion | 34.78 | 35.62 |
| PGSC0003DMT400043513 | Potato | mitochondrion, plasma membrane | 32.11 | 32.65 |
| Solyc04g079760.2.1 | Tomato | mitochondrion, plasma membrane | 31.44 | 32.08 |
| KRG89511 | Soybean | mitochondrion | 30.1 | 30.82 |
| GSMUA_Achr7P27370_001 | Banana | mitochondrion | 32.44 | 29.48 |
| CDY52071 | Canola | mitochondrion | 25.75 | 27.8 |
| Bra027440.1-P | Field mustard | mitochondrion | 25.42 | 27.44 |
| CDY63350 | Canola | mitochondrion | 24.75 | 27.01 |
| TraesCS7A01G407800.1 | Wheat | plastid | 20.74 | 23.66 |
| TraesCS2A01G133900.1 | Wheat | mitochondrion | 20.4 | 21.71 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G379800.1 | EnsemblPlantsGene:TraesCS5A01G379800 | InterPro:UPF0114 | PANTHER:PTHR31721 | PANTHER:PTHR31721:SF3 | PFAM:PF03350 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr5A:+:577708317..577709443
Molecular Weight (calculated)
32358.9 Da
IEP (calculated)
10.570
GRAVY (calculated)
0.280
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARAACTGR LLRATTAKDS RLPSSSPAAS RPACRIPSLK FPFLWDTKAR QGKISRAAEQ RAALITLGAA SASTTEEKQL LPGEASSVDL LLPLAYEVTR
101: RLVLRQFGET WLALTRRRWA KVAEAVVHQG IVRCQSFTLI GVAGSLLGSV PCFLEGCGIV VESFFLQFRA MSQTVDPAEI IKLLIEALDM FLIGTALLTF
201: AMGMYGMFYG SQRVQEPIYE RLKKGARIRS VTQAKSRFGH AVILLLQAGV LEKFKSVPLV TGLDMTCFAG AVLASSAGVF LLSRLSAHPQ SCNKQASFA
101: RLVLRQFGET WLALTRRRWA KVAEAVVHQG IVRCQSFTLI GVAGSLLGSV PCFLEGCGIV VESFFLQFRA MSQTVDPAEI IKLLIEALDM FLIGTALLTF
201: AMGMYGMFYG SQRVQEPIYE RLKKGARIRS VTQAKSRFGH AVILLLQAGV LEKFKSVPLV TGLDMTCFAG AVLASSAGVF LLSRLSAHPQ SCNKQASFA
001: MGVFRAEDKN ISKKKVIYSC RFMTFLGTLG SLLGSVLCFI KGCMYVVDSF LQYSVNRGKV IFLLVEAIDI YLLGTVMLVF GLGLYELFIS NLDTSESRTH
101: DIVSNRSSLF GMFTLKERPQ WLEVKSVSEL KTKLGHVIVM LLLIGLFDKS KRVVITSVTD LLCISVSIFF SSACLFLLSR LNGSH
101: DIVSNRSSLF GMFTLKERPQ WLEVKSVSEL KTKLGHVIVM LLLIGLFDKS KRVVITSVTD LLCISVSIFF SSACLFLLSR LNGSH
Arabidopsis Description
AT4g19390/T5K18_170 [Source:UniProtKB/TrEMBL;Acc:Q94JM4]
SUBAcon: [plasma membrane,extracellular,nucleus]
SUBAcon: [plasma membrane,extracellular,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.