Factsheet for Solyc04g079760.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 2
mitochondrion 4
peroxisome 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043513	Potato	mitochondrion, plasma membrane	79.52	79.25
VIT_18s0001g11680.t01	Wine grape	mitochondrion	41.64	41.78
KRG89511	Soybean	mitochondrion	41.3	41.44
CDY63350	Canola	mitochondrion	32.76	35.04
CDY52071	Canola	mitochondrion	32.42	34.3
Bra027440.1-P	Field mustard	mitochondrion	31.74	33.57
TraesCS5B01G383400.1	Wheat	mitochondrion	33.45	33.33
TraesCS5D01G389300.1	Wheat	mitochondrion, plastid	33.45	32.78
HORVU5Hr1G093860.2	Barley	plastid	32.76	31.58
TraesCS5A01G379800.1	Wheat	plastid	32.08	31.44
Solyc01g087710.2.1	Tomato	nucleus	22.18	29.55
GSMUA_Achr7P27370_001	Banana	mitochondrion	32.76	29.18
EER93488	Sorghum	plastid	30.38	28.62
Os03t0739700-01	Rice	plastid	31.4	26.74
Solyc01g087680.2.1	Tomato	plastid	24.57	26.57
Solyc08g075280.2.1	Tomato	plastid	22.18	25.49

Protein Annotations

EnsemblPlants:Solyc04g079760.2.1	EnsemblPlantsGene:Solyc04g079760.2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:UPF0114
PANTHER:PTHR31721	PANTHER:PTHR31721:SF3	PFAM:PF03350	SEG:seg	TMHMM:TMhelix	UniParc:UPI00027673A6
UniProt:K4BV55	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr4:+:64106156..64108160

Molecular Weight (calculated)

32053.9 Da

IEP (calculated)

9.615

GRAVY (calculated)

0.396

Length

293 amino acids

Sequence
(BLAST)

001: MAINGRLLRT SKQMGLGNNI GGQNQYYSLT NNYSLRFKCL SKGRLIGGAE KKVVVVATKA VGTAVVSEPI TTQNWKISDV SLVADNVSDL IFQKLKNLLK
101: QMPQKLHHLQ SSIEKGILDC RFFSLLAVAG TLIGSLLCFI EGCYLIIESY IHYFIAISHK SDLGHVVQLL IEAIDMFLLG TAMLTFGMGL YVMFVGSRNI
201: NVKGDDDDQL SGKKLYYFQT LPSLMGMKSV MQAKARIGHA LIMLLQVGVL EKFKNIPVVN GLDLACFAAA VFVSSICVFI LSRLAATNTK AGD

Best Arabidopsis Sequence Match ( AT4G19390.1 )
(BLAST)

001: MTTPCRTINA NAIAAPSPSG LIFNGFRDFV PIEKRLVISS FRGLKLPSRT TKTITSSDWS WSYRSPGRLA SASTSTSAST STSAAVTSNS TNRFEALEEG
101: IEKVIYSCRF MTFLGTLGSL LGSVLCFIKG CMYVVDSFLQ YSVNRGKVIF LLVEAIDIYL LGTVMLVFGL GLYELFISNL DTSESRTHDI VSNRSSLFGM
201: FTLKERPQWL EVKSVSELKT KLGHVIVMLL LIGLFDKSKR VVITSVTDLL CISVSIFFSS ACLFLLSRLN GSH

Arabidopsis Description

AT4g19390/T5K18_170 [Source:UniProtKB/TrEMBL;Acc:Q94JM4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.