Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G205800.1 | Wheat | cytosol, nucleus, plastid | 78.69 | 85.12 |
| TraesCS6B01G197500.1 | Wheat | nucleus | 70.24 | 29.84 |
| VIT_18s0122g00570.t01 | Wine grape | extracellular | 1.01 | 10.59 |
| VIT_03s0017g01050.t01 | Wine grape | endoplasmic reticulum, nucleus, vacuole | 0.68 | 6.9 |
| TraesCS5B01G537600.1 | Wheat | mitochondrion, plastid | 1.92 | 5.7 |
| TraesCS5B01G570700.1 | Wheat | mitochondrion | 1.92 | 5.67 |
| TraesCS7B01G225200.1 | Wheat | nucleus, plastid | 2.93 | 4.63 |
| TraesCS3B01G231800.2 | Wheat | nucleus | 5.64 | 4.62 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G538100.1 | EnsemblPlantsGene:TraesCS5B01G538100 | Gene3D:3.30.160.360 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:FYrich_C | InterPro:FYrich_N | InterPro:IPR003888 | InterPro:IPR003889 | PANTHER:PTHR14140 |
| PANTHER:PTHR14140:SF29 | PFscan:PS51542 | PFscan:PS51543 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5B:-:693697792..693709464
Molecular Weight (calculated)
98825.6 Da
IEP (calculated)
5.900
GRAVY (calculated)
-0.431
Length
887 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLRGMPWNN QQLPLYDIYR AMNEDTIRIT VESIVSVADG AHLTELATSH FEGLLLNNTT PFDGNHFMPA FSLPHSFSMR QQFPPVDQSF IADGSIDQRS
101: NHTRGRRRDF PQTSALPKFS EKHEFGSSST FKEPSFFTKA TDPSRKEERN PPKPPKFLAE NCNRQAHHGS VGLPVQYQDF FITNLGEIEK HASYHNCHQI
201: WPVGFTSYWH DRVTGSLFEC EVCDGGSFAP LFKVRRLPCS VFPLPEASTI LSQNDARKAA ETKESSSFIG DTANDMDDDL YMMMDIPSET NQDFLSCLTN
301: DTEDKRTSLD CNDVQSSNMM SQILPSNSKN VPPSKEANIN DQIGEFKFEG TSSSSVWGMI SSAMVEACEK MYTEHGHLVF SCTHNSENHL LNKGSGCQNF
401: DGPYAPLTRF CSSNGPSIQR VTEKKNDVEA TYTLLKHWLY HDRIGLDLEF VQEIVESLPR STSCVNYQFL CNRAEFHSSV TVASGLLLSV HKDGQSNVDT
501: PYGRHVGVTG LHDLAQPSGS SIRKLPPGRP ISHKLQPESA ADVLQIWEFL GRFAEIIDLE EVPSYEQLED ELAEPWPICA SQKETLSKGI QECRDYSSPM
601: NSPANSSIPH SNSESGLSNN EEIVSVFIPV ETSSMKEARL DKLAAQTLGR CTGTVLPRVH LALIKVLFGE VLSKLNIDPK ESKPRRGRKK DTESLVSTKE
701: FNFDMLTANK LTWPELTRRY MLAISSINGC MDVSDISSRE GVKLFRCLHG DGGILCGAVP GVAGMEKDAL LLLEAENLIC SSLSSEGNKV FMMDYKYSAE
801: VPIADNRTLP DWAKVLEPVR KLPTNVGTRI RNCVYEALDR KPPEWARKVL EHSISKEVYK ANASGRTKVS NAPAGCSYCI LAVPDCV
101: NHTRGRRRDF PQTSALPKFS EKHEFGSSST FKEPSFFTKA TDPSRKEERN PPKPPKFLAE NCNRQAHHGS VGLPVQYQDF FITNLGEIEK HASYHNCHQI
201: WPVGFTSYWH DRVTGSLFEC EVCDGGSFAP LFKVRRLPCS VFPLPEASTI LSQNDARKAA ETKESSSFIG DTANDMDDDL YMMMDIPSET NQDFLSCLTN
301: DTEDKRTSLD CNDVQSSNMM SQILPSNSKN VPPSKEANIN DQIGEFKFEG TSSSSVWGMI SSAMVEACEK MYTEHGHLVF SCTHNSENHL LNKGSGCQNF
401: DGPYAPLTRF CSSNGPSIQR VTEKKNDVEA TYTLLKHWLY HDRIGLDLEF VQEIVESLPR STSCVNYQFL CNRAEFHSSV TVASGLLLSV HKDGQSNVDT
501: PYGRHVGVTG LHDLAQPSGS SIRKLPPGRP ISHKLQPESA ADVLQIWEFL GRFAEIIDLE EVPSYEQLED ELAEPWPICA SQKETLSKGI QECRDYSSPM
601: NSPANSSIPH SNSESGLSNN EEIVSVFIPV ETSSMKEARL DKLAAQTLGR CTGTVLPRVH LALIKVLFGE VLSKLNIDPK ESKPRRGRKK DTESLVSTKE
701: FNFDMLTANK LTWPELTRRY MLAISSINGC MDVSDISSRE GVKLFRCLHG DGGILCGAVP GVAGMEKDAL LLLEAENLIC SSLSSEGNKV FMMDYKYSAE
801: VPIADNRTLP DWAKVLEPVR KLPTNVGTRI RNCVYEALDR KPPEWARKVL EHSISKEVYK ANASGRTKVS NAPAGCSYCI LAVPDCV
0001: MEPTDSTNEQ LGDTKTAAVK EESRSFLGID LNEIPTGATL GGGCTAGQDD DGEYEPVEVV RSIHDNPDPA PGAPAEVPEP DRDASCGACG RPESIELVVV
0101: CDACERGFHM SCVNDGVEAA PSADWMCSDC RTGGERSKLW PLGVKSKLIL DMNASPPSDA EGYGAEETSD SRKHMLASSS CIGNSFDYAM MHSSFSSLGR
0201: GHASLEASGL MSRNTKMSMD ALGSHNLGFG FPLNLNNSSL PMRFPSLDPS ELFLQNLRHF ISERHGVLED GWRVEFRQPL NGYQLCAVYC APNGKTFSSI
0301: QEVACYLGLA INGNYSCMDA EIRNENSLLQ ERLHTPKRRK TSRWPNNGFP EQKGSSVSAQ LRRFPFNGQT MSPFAVKSGT HFQAGGSLSS GNNGCGCEEA
0401: KNGCPMQFED FFVLSLGRID IRQSYHNVNV IYPIGYKSCW HDKITGSLFT CEVSDGNSGP IFKVTRSPCS KSFIPAGSTV FSCPKIDEMV EQNSDKLSNR
0501: RDSTQERDDD ASVEILLSEH CPPLGDDILS CLREKSFSKT VNSLRSEVDS SRVDFDKNLS YDQDHGVEIG DIVVEEDSLS DAWKKVSQKL VDACSIVLKQ
0601: KGTLNFLCKH VDRETSEINW DTMNEKDNVI LSLSKFCCSL APCSVTCGEK DKSEFAAVVD ALSRWLDQNR FGLDADFVQE MIEHMPGAES CTNYRTLKSR
0701: SSSSVPITVA EGALVVKPKG GENVKDEVFG EISRKAKKPK LNGGHGVRNL HPPPGRPMCL RLPPGLVGDF LQVSEVFWRF HEILGFEEAF SPENLEQELI
0801: NPVFDGLFLD KPGKDDKRSE INFTDKDSTA TKLFSLFDES RQPFPAKNTS ASELKEKKAG DSSDFKISDS SRGSCVGALL TRAHISLLQV LICELQSKVA
0901: AFVDPNFDSG ESRSRRGRKK DDSTLSAKRN KLHMLPVNEF TWPELARRYI LSLLSMDGNL ESAEIAARES GKVFRCLQGD GGLLCGSLTG VAGMEADSML
1001: LAEAIKKISG SLTSENDVLS VEDDDSDGLD ATETNTCSGD IPEWAQVLEP VKKLPTNVGT RIRKCVYEAL ERNPPEWAKK ILEHSISKEI YKGNASGPTK
1101: KAVLSLLADI RGGDLVQRSI KGTKKRTYIS VSDVIMKKCR AVLRGVAAAD EDKVLCTLLG RKLLNSSDND DDGLLGSPAM VSRPLDFRTI DLRLAAGAYD
1201: GSTEAFLEDV LELWSSIRVM YADQPDCVDL VATLSEKFKS LYEAEVVPLV QKLKDYRKLE CLSAEMKKEI KDIVVSVNKL PKAPWDEGVC KVCGVDKDDD
1301: SVLLCDTCDA EYHTYCLNPP LIRIPDGNWY CPSCVIAKRM AQEALESYKL VRRRKGRKYQ GELTRASMEL TAHLADVMEE KDYWEFSAEE RILLLKLLCD
1401: ELLSSSLVHQ HLEQCAEAII EMQQKLRSLS SEWKNAKMRQ EFLTAKLAKV EPSILKEVGE PHNSSYFADQ MGCDPQPQEG VGDGVTRDDE TSSTAYLNKN
1501: QGKSPLETDT QPGESHVNFG ESKISSPETI SSPGRHELPI ADTSPLVTDN LPEKDTSETL LKSVGRNHET HSPNSNAVEL PTAHDASSQA SQELQACQQD
1601: LSATSNEIQN LQQSIRSIES QLLKQSIRRD FLGTDASGRL YWGCCFPDEN PRILVDGSIS LQKPVQADLI GSKVPSPFLH TVDHGRLRLS PWTYYETETE
1701: ISELVQWLHD DDLKERDLRE SILWWKRLRY GDVQKEKKQA QNLSAPVFAT GLETKAAMSM EKRYGPCIKL EMETLKKRGK KTKVAEREKL CRCECLESIL
1801: PSMIHCLICH KTFASDDEFE DHTESKCIPY SLATEEGKDI SDSSKAKESL KSDYLNVKSS AGKDVAEISN VSELDSGLIR YQEEESISPY HFEEICSKFV
1901: TKDCNRDLVK EIGLISSNGI PTFLPSSSTH LNDSVLISAK SNKPDGGDSG DQVIFAGPET NVEGLNSESN MSFDRSVTDS HGGPLDKPSG LGFGFSEQKN
2001: KKSSGSGLKS CCVVPQAALK RVTGKALPGF RFLKTNLLDM DVALPEEALR PSKSHPNRRR AWRVFVKSSQ SIYELVQATI VVEDMIKTEY LKNEWWYWSS
2101: LSAAAKISTL SALSVRIFSL DAAIIYDKPI TPSNPIDETK PIISLPDQKS QPVSDSQERS SRVRRSGKKR KEPEGS
0101: CDACERGFHM SCVNDGVEAA PSADWMCSDC RTGGERSKLW PLGVKSKLIL DMNASPPSDA EGYGAEETSD SRKHMLASSS CIGNSFDYAM MHSSFSSLGR
0201: GHASLEASGL MSRNTKMSMD ALGSHNLGFG FPLNLNNSSL PMRFPSLDPS ELFLQNLRHF ISERHGVLED GWRVEFRQPL NGYQLCAVYC APNGKTFSSI
0301: QEVACYLGLA INGNYSCMDA EIRNENSLLQ ERLHTPKRRK TSRWPNNGFP EQKGSSVSAQ LRRFPFNGQT MSPFAVKSGT HFQAGGSLSS GNNGCGCEEA
0401: KNGCPMQFED FFVLSLGRID IRQSYHNVNV IYPIGYKSCW HDKITGSLFT CEVSDGNSGP IFKVTRSPCS KSFIPAGSTV FSCPKIDEMV EQNSDKLSNR
0501: RDSTQERDDD ASVEILLSEH CPPLGDDILS CLREKSFSKT VNSLRSEVDS SRVDFDKNLS YDQDHGVEIG DIVVEEDSLS DAWKKVSQKL VDACSIVLKQ
0601: KGTLNFLCKH VDRETSEINW DTMNEKDNVI LSLSKFCCSL APCSVTCGEK DKSEFAAVVD ALSRWLDQNR FGLDADFVQE MIEHMPGAES CTNYRTLKSR
0701: SSSSVPITVA EGALVVKPKG GENVKDEVFG EISRKAKKPK LNGGHGVRNL HPPPGRPMCL RLPPGLVGDF LQVSEVFWRF HEILGFEEAF SPENLEQELI
0801: NPVFDGLFLD KPGKDDKRSE INFTDKDSTA TKLFSLFDES RQPFPAKNTS ASELKEKKAG DSSDFKISDS SRGSCVGALL TRAHISLLQV LICELQSKVA
0901: AFVDPNFDSG ESRSRRGRKK DDSTLSAKRN KLHMLPVNEF TWPELARRYI LSLLSMDGNL ESAEIAARES GKVFRCLQGD GGLLCGSLTG VAGMEADSML
1001: LAEAIKKISG SLTSENDVLS VEDDDSDGLD ATETNTCSGD IPEWAQVLEP VKKLPTNVGT RIRKCVYEAL ERNPPEWAKK ILEHSISKEI YKGNASGPTK
1101: KAVLSLLADI RGGDLVQRSI KGTKKRTYIS VSDVIMKKCR AVLRGVAAAD EDKVLCTLLG RKLLNSSDND DDGLLGSPAM VSRPLDFRTI DLRLAAGAYD
1201: GSTEAFLEDV LELWSSIRVM YADQPDCVDL VATLSEKFKS LYEAEVVPLV QKLKDYRKLE CLSAEMKKEI KDIVVSVNKL PKAPWDEGVC KVCGVDKDDD
1301: SVLLCDTCDA EYHTYCLNPP LIRIPDGNWY CPSCVIAKRM AQEALESYKL VRRRKGRKYQ GELTRASMEL TAHLADVMEE KDYWEFSAEE RILLLKLLCD
1401: ELLSSSLVHQ HLEQCAEAII EMQQKLRSLS SEWKNAKMRQ EFLTAKLAKV EPSILKEVGE PHNSSYFADQ MGCDPQPQEG VGDGVTRDDE TSSTAYLNKN
1501: QGKSPLETDT QPGESHVNFG ESKISSPETI SSPGRHELPI ADTSPLVTDN LPEKDTSETL LKSVGRNHET HSPNSNAVEL PTAHDASSQA SQELQACQQD
1601: LSATSNEIQN LQQSIRSIES QLLKQSIRRD FLGTDASGRL YWGCCFPDEN PRILVDGSIS LQKPVQADLI GSKVPSPFLH TVDHGRLRLS PWTYYETETE
1701: ISELVQWLHD DDLKERDLRE SILWWKRLRY GDVQKEKKQA QNLSAPVFAT GLETKAAMSM EKRYGPCIKL EMETLKKRGK KTKVAEREKL CRCECLESIL
1801: PSMIHCLICH KTFASDDEFE DHTESKCIPY SLATEEGKDI SDSSKAKESL KSDYLNVKSS AGKDVAEISN VSELDSGLIR YQEEESISPY HFEEICSKFV
1901: TKDCNRDLVK EIGLISSNGI PTFLPSSSTH LNDSVLISAK SNKPDGGDSG DQVIFAGPET NVEGLNSESN MSFDRSVTDS HGGPLDKPSG LGFGFSEQKN
2001: KKSSGSGLKS CCVVPQAALK RVTGKALPGF RFLKTNLLDM DVALPEEALR PSKSHPNRRR AWRVFVKSSQ SIYELVQATI VVEDMIKTEY LKNEWWYWSS
2101: LSAAAKISTL SALSVRIFSL DAAIIYDKPI TPSNPIDETK PIISLPDQKS QPVSDSQERS SRVRRSGKKR KEPEGS
Arabidopsis Description
MBD9MBD9 [Source:UniProtKB/TrEMBL;Acc:A0A178VJY9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.