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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G169600.1 Wheat nucleus 97.84 97.66
TraesCS6D01G159400.1 Wheat nucleus 97.7 97.56
HORVU6Hr1G034680.3 Barley nucleus 95.79 95.51
TraesCS5B01G538100.1 Wheat nucleus 29.84 70.24
Os02t0192400-01 Rice nucleus 28.93 63.92
EES04674 Sorghum nucleus 62.74 61.97
Zm00001d053697_P007 Maize nucleus 61.97 60.27
VIT_13s0047g00420.t01 Wine grape cytosol 2.63 57.29
TraesCS5B01G537600.1 Wheat mitochondrion, plastid 6.9 48.32
VIT_13s0101g00020.t01 Wine grape cytosol 2.63 45.08
TraesCS5B01G570700.1 Wheat mitochondrion 6.23 43.33
GSMUA_Achr3P12190_001 Banana nucleus 35.78 35.83
VIT_01s0026g00150.t01 Wine grape nucleus 32.14 33.58
VIT_14s0066g01450.t01 Wine grape nucleus 33.38 33.27
KRG93338 Soybean nucleus 34.05 32.69
KRH20317 Soybean nucleus 34.29 32.52
Bra040518.1-P Field mustard nucleus 31.8 30.98
AT3G01460.1 Thale cress nucleus 31.99 30.7
CDY49055 Canola nucleus 31.42 30.7
CDY37520 Canola nucleus 31.42 30.61
CDY28674 Canola nucleus 31.9 30.41
Solyc05g005640.2.1 Tomato nucleus 29.12 30.37
Bra039117.1-P Field mustard nucleus 28.88 29.62
TraesCS7B01G225200.1 Wheat nucleus, plastid 4.45 16.58
TraesCS3B01G231800.2 Wheat nucleus 5.6 10.81
Protein Annotations
Gene3D:1.20.920.10Gene3D:3.30.160.360Gene3D:3.30.40.10MapMan:35.1InterPro:BromodomainInterPro:Bromodomain-like_sf
ncoils:CoilInterPro:FYrich_CInterPro:FYrich_NGO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634InterPro:IPR001487InterPro:IPR003888
InterPro:IPR003889InterPro:IPR013083InterPro:IPR019787InterPro:IPR036427PFAM:PF00439PFAM:PF00628
PFAM:PF15612PFAM:PF15613ScanProsite:PS01359PFscan:PS50016PFscan:PS51542PFscan:PS51543
PANTHER:PTHR14140PANTHER:PTHR14140:SF29SMART:SM00249SUPFAM:SSF47370SUPFAM:SSF57903EnsemblPlantsGene:TraesCS6B01G197500
EnsemblPlants:TraesCS6B01G197500.1InterPro:WHIM1_domInterPro:WHIM2_domInterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHD
InterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHDTIGR:cd15519SEG:seg::
Description
No Description!
Coordinates
chr6B:-:234845513..234870831
Molecular Weight (calculated)
231643.0 Da
IEP (calculated)
5.391
GRAVY (calculated)
-0.514
Length
2088 amino acids
Sequence
(BLAST)
0001: MDRPPHLDID LNEAPSPPPS PPVAVPQSPP RGFAAPIFAP PPPLPPPPPP PPQPQPPANA QAQLLLAHQA REIALAYHRG ESWRLAAATA IAAATAGSSV
0101: EVPPPAQHPG VAGWGNPPPP CASCGLPELP GATIICDACE RGFHESCVHV WGPLMRQPPP PPLPTPPGVR RPPVAVNEDW MCPACEIGGA HSKRWKLRAV
0201: PLDINAAPRE DPVAVTIGDI TRVSVADGAH LTELATPRFE GLQLNNTTPF DGNHFMPAFG LPHCFRQQFP PVDQNFIADG NIEQRSNHTR RRRRDFPQTS
0301: ALPKFSEKHE FGSSSILMEP SFFMKATAPS PTEERNPLKP PKFLAENCNR QPHHRSVGLP VQYQDFFITS LGEIDKQASY HNSHQIWPVG FTSYWHDRVT
0401: GSLFECEVCD GGSFGPLFKV RRLPCSVFPL PEATTILSQN GARKADTIET KESSSFMGDA ANDMDDLYMI LDVPSETNQD FLSCLTNDTE DKRTSLGCND
0501: VQSSNMTSQI LPSNSENVPP SKEANINDQI GEFTFEGTSS SSVWRMISCA MVEACEKMYK EHGHLVFSCT HSSGNHLLNK GSECQNFDGP YAPLTRFCSS
0601: NGPSIPRVIE KKDDVESTYT LLKKWLYHDR IGLDLEFVQE IVESLPRSRS CINYQFLCNR AEFHSSMTVA SGLLISVHKD GQSNGDMSYD RHGAVTGLHD
0701: HAQPSGSSIR ELPPGRPISH KLPPESAGDV FQIWEFLGRF AEIIDLKEVP SYEQLEDELV DPWPVCGNQK ETLSKGIQQC RDYSSPMNSP ANVSISHSNS
0801: ESGLSNNEEI VSVFIPVETS SMKEAGQDKL AAQTLGRCTG VVLPGVHLAL FKVLFGELLS KVAIFVDPNI DPKESKPRRG RKKDTESLIS TKEFNFDMLT
0901: ANKLTWPELA RRYMLAISSI NGCMDVSDIS SREGVKLFRC LQGDGGILCG AVPGVAGMEK DALLLLEAEN LICSSLSSEG NKVFMMDYKY TDMIDSAEVP
1001: IADNRTLPDW AEPLEPVRKL PTNVGTRIRK CVYEALDRKP PEWARTILEH SISKEVYKGN ASGPTKKAVL SVLSEACRVI VPQKPENPRN ERKTISISEV
1101: ILKKCRIALR HAISSDESKL FGNLLGTTLM NSNENEDEGI LGFSGMVPRP LDFRTIDTRL AMGAYCGSWE TFFEDVQEVI RNLHTAFADR ADVVEMVAEL
1201: SQSLESLYKT EVLDLVQKFD CHLSNENTDS EIHEELHDIL TAATKLPKAP WEEGVCKVCG IDRDDESVLL CDECDSEYHT YCLNPPLARI PQGDWFCPSC
1301: ILKPKKKSRL DQGAQDSKRQ RKGAESHVHD KPSCMSGQKK SHLDQGVQDL KRQRKGAFHD ILFKLTAAME QKEYWELSTQ ERINMLKFLC DEMLNTVLVR
1401: EHIEKCPDKL NDLQQKFRAL NFELKDLKYK EEMRTSYARQ SRWSKTEQHV SNCSGLAENQ QNEVAIASDH LEESEQGNTV VNLNHPAEGT PGQLNVGKPC
1501: KSDNGMSMVE DNKSLGLSEQ PSGTGSDRIE GNIMNEGSRD NFNLVDTPIA EREPVATPLS TPGGELPDEN ASASQDNLKM STTRSLEQAA DNGEMDTLSD
1601: EISKVQESIG TVESQLNMSS LRRDCLGKDS LGRLYWVLGR SGKRPLLVAD GSMLICKERD INMVNSYPPS TSDCKGWNSA SVVIYESDDE IRNLVDWLRE
1701: YDPREKELKD AIQQWQRHLY HLGNFVLSDP PISKGSNSEQ QLMDLPSTRA GAILEKTCRC DCLEPIWPAR HHCVACHETY SKLTEYEEHA GKCNGDVKEK
1801: DSVDPSSTAE SRKLKSCPYD FEEICRKFTT NDSNKEIVKD IGLIGSNGVP SFVPSPAFYL EPPVILNKNK KDDIPNDWVS SLEECQAMSA QKFGQEGSNS
1901: GQNCPGSTGD ENVSKSKKPA SESTSCEEAS SATDKPTRLL AVNGGLVPES SLRPVIGRNS HILKQQKINL LDIDAALPEE ALRASKSQQI RRRSWRTFVK
2001: HAESISEMVL ATSVLESMIK SEFLKNDWWY WSSFTVAMKT STVSSLALRI YTLDDCIMYT KEPNTMLADS IKVVNKGKRR KEPEPSAS
Best Arabidopsis Sequence Match ( AT3G01460.1 )
(BLAST)
0001: MEPTDSTNEQ LGDTKTAAVK EESRSFLGID LNEIPTGATL GGGCTAGQDD DGEYEPVEVV RSIHDNPDPA PGAPAEVPEP DRDASCGACG RPESIELVVV
0101: CDACERGFHM SCVNDGVEAA PSADWMCSDC RTGGERSKLW PLGVKSKLIL DMNASPPSDA EGYGAEETSD SRKHMLASSS CIGNSFDYAM MHSSFSSLGR
0201: GHASLEASGL MSRNTKMSMD ALGSHNLGFG FPLNLNNSSL PMRFPSLDPS ELFLQNLRHF ISERHGVLED GWRVEFRQPL NGYQLCAVYC APNGKTFSSI
0301: QEVACYLGLA INGNYSCMDA EIRNENSLLQ ERLHTPKRRK TSRWPNNGFP EQKGSSVSAQ LRRFPFNGQT MSPFAVKSGT HFQAGGSLSS GNNGCGCEEA
0401: KNGCPMQFED FFVLSLGRID IRQSYHNVNV IYPIGYKSCW HDKITGSLFT CEVSDGNSGP IFKVTRSPCS KSFIPAGSTV FSCPKIDEMV EQNSDKLSNR
0501: RDSTQERDDD ASVEILLSEH CPPLGDDILS CLREKSFSKT VNSLRSEVDS SRVDFDKNLS YDQDHGVEIG DIVVEEDSLS DAWKKVSQKL VDACSIVLKQ
0601: KGTLNFLCKH VDRETSEINW DTMNEKDNVI LSLSKFCCSL APCSVTCGEK DKSEFAAVVD ALSRWLDQNR FGLDADFVQE MIEHMPGAES CTNYRTLKSR
0701: SSSSVPITVA EGALVVKPKG GENVKDEVFG EISRKAKKPK LNGGHGVRNL HPPPGRPMCL RLPPGLVGDF LQVSEVFWRF HEILGFEEAF SPENLEQELI
0801: NPVFDGLFLD KPGKDDKRSE INFTDKDSTA TKLFSLFDES RQPFPAKNTS ASELKEKKAG DSSDFKISDS SRGSCVGALL TRAHISLLQV LICELQSKVA
0901: AFVDPNFDSG ESRSRRGRKK DDSTLSAKRN KLHMLPVNEF TWPELARRYI LSLLSMDGNL ESAEIAARES GKVFRCLQGD GGLLCGSLTG VAGMEADSML
1001: LAEAIKKISG SLTSENDVLS VEDDDSDGLD ATETNTCSGD IPEWAQVLEP VKKLPTNVGT RIRKCVYEAL ERNPPEWAKK ILEHSISKEI YKGNASGPTK
1101: KAVLSLLADI RGGDLVQRSI KGTKKRTYIS VSDVIMKKCR AVLRGVAAAD EDKVLCTLLG RKLLNSSDND DDGLLGSPAM VSRPLDFRTI DLRLAAGAYD
1201: GSTEAFLEDV LELWSSIRVM YADQPDCVDL VATLSEKFKS LYEAEVVPLV QKLKDYRKLE CLSAEMKKEI KDIVVSVNKL PKAPWDEGVC KVCGVDKDDD
1301: SVLLCDTCDA EYHTYCLNPP LIRIPDGNWY CPSCVIAKRM AQEALESYKL VRRRKGRKYQ GELTRASMEL TAHLADVMEE KDYWEFSAEE RILLLKLLCD
1401: ELLSSSLVHQ HLEQCAEAII EMQQKLRSLS SEWKNAKMRQ EFLTAKLAKV EPSILKEVGE PHNSSYFADQ MGCDPQPQEG VGDGVTRDDE TSSTAYLNKN
1501: QGKSPLETDT QPGESHVNFG ESKISSPETI SSPGRHELPI ADTSPLVTDN LPEKDTSETL LKSVGRNHET HSPNSNAVEL PTAHDASSQA SQELQACQQD
1601: LSATSNEIQN LQQSIRSIES QLLKQSIRRD FLGTDASGRL YWGCCFPDEN PRILVDGSIS LQKPVQADLI GSKVPSPFLH TVDHGRLRLS PWTYYETETE
1701: ISELVQWLHD DDLKERDLRE SILWWKRLRY GDVQKEKKQA QNLSAPVFAT GLETKAAMSM EKRYGPCIKL EMETLKKRGK KTKVAEREKL CRCECLESIL
1801: PSMIHCLICH KTFASDDEFE DHTESKCIPY SLATEEGKDI SDSSKAKESL KSDYLNVKSS AGKDVAEISN VSELDSGLIR YQEEESISPY HFEEICSKFV
1901: TKDCNRDLVK EIGLISSNGI PTFLPSSSTH LNDSVLISAK SNKPDGGDSG DQVIFAGPET NVEGLNSESN MSFDRSVTDS HGGPLDKPSG LGFGFSEQKN
2001: KKSSGSGLKS CCVVPQAALK RVTGKALPGF RFLKTNLLDM DVALPEEALR PSKSHPNRRR AWRVFVKSSQ SIYELVQATI VVEDMIKTEY LKNEWWYWSS
2101: LSAAAKISTL SALSVRIFSL DAAIIYDKPI TPSNPIDETK PIISLPDQKS QPVSDSQERS SRVRRSGKKR KEPEGS
Arabidopsis Description
MBD9MBD9 [Source:UniProtKB/TrEMBL;Acc:A0A178VJY9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.