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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G159400.1 Wheat nucleus 97.99 98.04
TraesCS6B01G197500.1 Wheat nucleus 97.66 97.84
HORVU6Hr1G034680.3 Barley nucleus 95.89 95.8
TraesCS4A01G324900.1 Wheat cytosol, mitochondrion, nucleus, vacuole 60.18 77.0
Os02t0192400-01 Rice nucleus 29.06 64.34
TraesCS3A01G530300.1 Wheat cytosol, extracellular, mitochondrion, nucleus 5.11 64.07
EES04674 Sorghum nucleus 62.86 62.2
Zm00001d053697_P007 Maize nucleus 61.9 60.32
VIT_13s0047g00420.t01 Wine grape cytosol 2.58 56.25
TraesCS4A01G325100.1 Wheat plastid 6.55 48.07
VIT_13s0101g00020.t01 Wine grape cytosol 2.68 45.9
GSMUA_Achr3P12190_001 Banana nucleus 35.8 35.92
VIT_01s0026g00150.t01 Wine grape nucleus 32.31 33.83
VIT_14s0066g01450.t01 Wine grape nucleus 33.51 33.46
KRG93338 Soybean nucleus 33.94 32.64
KRH20317 Soybean nucleus 34.03 32.33
Bra040518.1-P Field mustard nucleus 31.98 31.22
AT3G01460.1 Thale cress nucleus 32.17 30.93
CDY49055 Canola nucleus 31.5 30.84
CDY37520 Canola nucleus 31.5 30.75
CDY28674 Canola nucleus 32.07 30.64
Solyc05g005640.2.1 Tomato nucleus 29.11 30.42
Bra039117.1-P Field mustard nucleus 29.02 29.81
TraesCS7A01G324700.2 Wheat nucleus, plastid 4.3 15.93
Protein Annotations
Gene3D:1.20.920.10Gene3D:3.30.40.10MapMan:35.1InterPro:BromodomainInterPro:Bromodomain-like_sfncoils:Coil
InterPro:DDT_domInterPro:FYrich_CInterPro:FYrich_NGO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634InterPro:IPR001487InterPro:IPR003888
InterPro:IPR003889InterPro:IPR013083InterPro:IPR018501InterPro:IPR019787InterPro:IPR036427PFAM:PF00439
PFAM:PF00628PFAM:PF15612PFAM:PF15613ScanProsite:PS01359PFscan:PS50016PFscan:PS50827
PFscan:PS51542PFscan:PS51543PANTHER:PTHR14140PANTHER:PTHR14140:SF29SMART:SM00249SUPFAM:SSF47370
SUPFAM:SSF57903EnsemblPlantsGene:TraesCS6A01G169600EnsemblPlants:TraesCS6A01G169600.1InterPro:WHIM1_domInterPro:WHIM2_domInterPro:Zinc_finger_PHD-type_CS
InterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHDTIGR:cd15519SEG:seg
Description
No Description!
Coordinates
chr6A:-:178437531..178461888
Molecular Weight (calculated)
231876.0 Da
IEP (calculated)
5.421
GRAVY (calculated)
-0.506
Length
2092 amino acids
Sequence
(BLAST)
0001: MDRPPHLDID LNEAPSPPPS PPAAVPQSPP RGFAAPIFAP PPPLLLPPPP PPQPQPPANA QAQLLLAHQA REIALAYHRG ESWRLAAATA IAAVTAGSSV
0101: EVPPPAQHPG VAGWGNPPPP CASCGLPELP GATIICDACE RGFHESCVHV WGPLMRQPPP PPLPTPPGVR RPPVAVNEDW MCPACEIGGA HSKRWKLRAV
0201: PLDINAAPRE DPVAITVGDI TRVSVADGAH LTELATPRFE GLQLNNTTPF DGNHFMPAFG LPHCFSIRQQ FPPVDQNFIA DGNIEQRSNH TRRRRRDFPQ
0301: TSALPKFSEK HEFVSSSILM EPSFFMKATA PSPTEERNPL KPPKFLAENC NRQPHHRSVG LPVQYQDFFI TSLGEIDKQA SYHNCHQIWP VGFTSYWHDR
0401: VTGSLFECEV CDGGSFGPLF KVRRLPCSAF PLPEASTILS QNGARKADTI ETKESSSFIG DAANDMDDDL YMIRDVPSET NQDFLSCLTN DTEDKMTSLG
0501: CNDVQSSNMV SQILPSNSEN VPPSKEANIN DQIGEFTFEG TSSSSVWRMI SCAMVEACEK MYKEHGHLVF SCTHSSGNHL LNKGSGCQNF DGPYAPLTRF
0601: CSSNGPSIPR IIEKKNDVES TYTLLKKWLY HDRIGLDLEF VQEIVESLPR SRSCINYQFL CNRAEFHSSM TVASGLLISV HKDGQSNGDM SYDRHGAVTG
0701: LHDHVQPSSS SIRELPPGRP ISHKLPPESA GDVFQIWEFL GRFAEIIGLK EVPSYEQLED ELVDPWPVCG NQKETLLKGI QQCRDYSSPM NSPANVSISH
0801: SNSESGLSNN EEIVSVFIPV ETSSMKEAGQ DKLAAQTLGR CTGVVLPGVH LALFKVLFGE LLSKVAVFVD PNIDPKESKP RRGRKKDTES LISTKEFNFD
0901: MLTANKLTWP ELARRYMLAI SSINGCMDVS DISSREGVKL FRCLQGDGGI LCGAVPGVAG MEKDALLLLE AENLICSSLS SEGNKVFMMD YKYTGMIDSA
1001: EVPIADNRTL PDWAEPLEPV RKLPTNVGTR IRKCVYEALD RKPPEWARKI LEHSISKEVY KGNASGPTKK AVLSVLSEAC RVIVPQKPEN PRNERKTISI
1101: SEVILKKCRI ALRHAISSDE SKLFGNLLGT TLMNSNENED EGILGFSGMV PRPLDFRTID TRLAMGAYCG SWETFFEDVQ EVIRNLHTAF ADRADVVEMV
1201: AELSQSLESL YKTEVLDLVQ KFDCHLSNEN TDSEIHEELH EILTAATKLP KAPWEEGVCK VCGIDRDDES VLLCDECDSE YHTYCLNPPL ARIPQGDWFC
1301: PSCILKPKKK SRLDQGAQDS KRQRKGAESH VHDKPSCMSG QKKSHPDQGV QDLKRQRKGA FHDILIKLTV AMEQKEYWEL STQERINMLK FLCDEMLNTV
1401: LVREHIEKCP DKLNDLQQKF RALNFELKDL KYKEEMRTSY ARQSRWSKTE QHVSNCSGLA ENQQNEVAIA SDHLEESEQG NTGVNLNQPA EGTPPGQLNV
1501: GKPCKSDNGM SMVEENKSLE LSEQPSGTGS DRIEGNIMNE RSRDNFNLVD TPIAEREPVA TPLSTPGGEL PDENASASQD NLKMSTTRSL EQAADNGEMD
1601: TLSDEISKVQ ESIGTVESQL NMSSLRRDCL GKDSLGRLYW VLGRSGKRPL LVADGSMLIC KERDINMVNS YPPSTSDCKG WNSASVVIYE SDDEIRSLVD
1701: WLREYDPREK ELKDAIQQWQ RHLYHLGNFV LSDPPISKGS NSEQQLMDLP STKAGAILEK TCRCDCLEPI WPAQHHCVAC HETYSTSTEY EEHAGKCNGD
1801: VKEKDSVDPS STAESRKLKS CPYDFEEICR KFTTNDSNKE IVKDIGLIGS NGVPSFVPSP ASYLEPPVIL NKNKKDDIPN DWVSSLEECQ AMSAQKLGQE
1901: GSNSGQNCPG STGDENVSKS KKPASDSTSC EEASSATDKP TRLLAVNGGL VPESSLRPVI GRNSHILKQQ KINLLDIDAA LPEEALRASK SQQIRRRSWR
2001: AFVKHAESIS EMVLATSVLE NMIKSEFLKN DWWYWSSFTV AMKTSTVSSL ALRIYTLDDC IMYTKEPNTM VADSTKVVNK GKRRKEPEPS AS
Best Arabidopsis Sequence Match ( AT3G01460.1 )
(BLAST)
0001: MEPTDSTNEQ LGDTKTAAVK EESRSFLGID LNEIPTGATL GGGCTAGQDD DGEYEPVEVV RSIHDNPDPA PGAPAEVPEP DRDASCGACG RPESIELVVV
0101: CDACERGFHM SCVNDGVEAA PSADWMCSDC RTGGERSKLW PLGVKSKLIL DMNASPPSDA EGYGAEETSD SRKHMLASSS CIGNSFDYAM MHSSFSSLGR
0201: GHASLEASGL MSRNTKMSMD ALGSHNLGFG FPLNLNNSSL PMRFPSLDPS ELFLQNLRHF ISERHGVLED GWRVEFRQPL NGYQLCAVYC APNGKTFSSI
0301: QEVACYLGLA INGNYSCMDA EIRNENSLLQ ERLHTPKRRK TSRWPNNGFP EQKGSSVSAQ LRRFPFNGQT MSPFAVKSGT HFQAGGSLSS GNNGCGCEEA
0401: KNGCPMQFED FFVLSLGRID IRQSYHNVNV IYPIGYKSCW HDKITGSLFT CEVSDGNSGP IFKVTRSPCS KSFIPAGSTV FSCPKIDEMV EQNSDKLSNR
0501: RDSTQERDDD ASVEILLSEH CPPLGDDILS CLREKSFSKT VNSLRSEVDS SRVDFDKNLS YDQDHGVEIG DIVVEEDSLS DAWKKVSQKL VDACSIVLKQ
0601: KGTLNFLCKH VDRETSEINW DTMNEKDNVI LSLSKFCCSL APCSVTCGEK DKSEFAAVVD ALSRWLDQNR FGLDADFVQE MIEHMPGAES CTNYRTLKSR
0701: SSSSVPITVA EGALVVKPKG GENVKDEVFG EISRKAKKPK LNGGHGVRNL HPPPGRPMCL RLPPGLVGDF LQVSEVFWRF HEILGFEEAF SPENLEQELI
0801: NPVFDGLFLD KPGKDDKRSE INFTDKDSTA TKLFSLFDES RQPFPAKNTS ASELKEKKAG DSSDFKISDS SRGSCVGALL TRAHISLLQV LICELQSKVA
0901: AFVDPNFDSG ESRSRRGRKK DDSTLSAKRN KLHMLPVNEF TWPELARRYI LSLLSMDGNL ESAEIAARES GKVFRCLQGD GGLLCGSLTG VAGMEADSML
1001: LAEAIKKISG SLTSENDVLS VEDDDSDGLD ATETNTCSGD IPEWAQVLEP VKKLPTNVGT RIRKCVYEAL ERNPPEWAKK ILEHSISKEI YKGNASGPTK
1101: KAVLSLLADI RGGDLVQRSI KGTKKRTYIS VSDVIMKKCR AVLRGVAAAD EDKVLCTLLG RKLLNSSDND DDGLLGSPAM VSRPLDFRTI DLRLAAGAYD
1201: GSTEAFLEDV LELWSSIRVM YADQPDCVDL VATLSEKFKS LYEAEVVPLV QKLKDYRKLE CLSAEMKKEI KDIVVSVNKL PKAPWDEGVC KVCGVDKDDD
1301: SVLLCDTCDA EYHTYCLNPP LIRIPDGNWY CPSCVIAKRM AQEALESYKL VRRRKGRKYQ GELTRASMEL TAHLADVMEE KDYWEFSAEE RILLLKLLCD
1401: ELLSSSLVHQ HLEQCAEAII EMQQKLRSLS SEWKNAKMRQ EFLTAKLAKV EPSILKEVGE PHNSSYFADQ MGCDPQPQEG VGDGVTRDDE TSSTAYLNKN
1501: QGKSPLETDT QPGESHVNFG ESKISSPETI SSPGRHELPI ADTSPLVTDN LPEKDTSETL LKSVGRNHET HSPNSNAVEL PTAHDASSQA SQELQACQQD
1601: LSATSNEIQN LQQSIRSIES QLLKQSIRRD FLGTDASGRL YWGCCFPDEN PRILVDGSIS LQKPVQADLI GSKVPSPFLH TVDHGRLRLS PWTYYETETE
1701: ISELVQWLHD DDLKERDLRE SILWWKRLRY GDVQKEKKQA QNLSAPVFAT GLETKAAMSM EKRYGPCIKL EMETLKKRGK KTKVAEREKL CRCECLESIL
1801: PSMIHCLICH KTFASDDEFE DHTESKCIPY SLATEEGKDI SDSSKAKESL KSDYLNVKSS AGKDVAEISN VSELDSGLIR YQEEESISPY HFEEICSKFV
1901: TKDCNRDLVK EIGLISSNGI PTFLPSSSTH LNDSVLISAK SNKPDGGDSG DQVIFAGPET NVEGLNSESN MSFDRSVTDS HGGPLDKPSG LGFGFSEQKN
2001: KKSSGSGLKS CCVVPQAALK RVTGKALPGF RFLKTNLLDM DVALPEEALR PSKSHPNRRR AWRVFVKSSQ SIYELVQATI VVEDMIKTEY LKNEWWYWSS
2101: LSAAAKISTL SALSVRIFSL DAAIIYDKPI TPSNPIDETK PIISLPDQKS QPVSDSQERS SRVRRSGKKR KEPEGS
Arabidopsis Description
MBD9MBD9 [Source:UniProtKB/TrEMBL;Acc:A0A178VJY9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.