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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • plasma membrane 1
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G01460.1 GSMUA_Achr9P09250_001 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_13s0047g00420.t01 Wine grape cytosol 2.97 64.58
HORVU5Hr1G123360.1 Barley cytosol, nucleus 3.31 57.98
VIT_13s0101g00020.t01 Wine grape cytosol 2.93 50.0
TraesCS3A01G530300.1 Wheat cytosol, extracellular, mitochondrion, nucleus 3.41 42.52
TraesCS5D01G556000.1 Wheat cytosol, extracellular, nucleus 3.36 42.17
HORVU5Hr1G123350.3 Barley cytosol 17.12 40.25
Os02t0192400-01 Rice nucleus 17.27 38.1
TraesCS4A01G324900.1 Wheat cytosol, mitochondrion, nucleus, vacuole 29.74 37.92
EES04674 Sorghum nucleus 37.36 36.85
Zm00001d053697_P007 Maize nucleus 37.12 36.05
HORVU6Hr1G034680.3 Barley nucleus 36.07 35.91
TraesCS6D01G159400.1 Wheat nucleus 35.97 35.87
TraesCS6A01G169600.1 Wheat nucleus 35.92 35.8
TraesCS6B01G197500.1 Wheat nucleus 35.83 35.78
VIT_01s0026g00150.t01 Wine grape nucleus 34.24 35.74
VIT_14s0066g01450.t01 Wine grape nucleus 35.49 35.32
KRG93338 Soybean nucleus 35.88 34.39
TraesCS4A01G325100.1 Wheat plastid 4.7 34.39
KRH20317 Soybean nucleus 36.26 34.33
TraesCS5B01G537600.1 Wheat mitochondrion, plastid 4.84 33.89
CDY37520 Canola nucleus 33.96 33.04
CDY49055 Canola nucleus 33.86 33.04
Bra040518.1-P Field mustard nucleus 33.72 32.8
AT3G01460.1 Thale cress nucleus 33.81 32.4
CDY28674 Canola nucleus 33.72 32.1
Bra039117.1-P Field mustard nucleus 31.18 31.93
Solyc05g005640.2.1 Tomato nucleus 29.06 30.27
TraesCS5B01G570700.1 Wheat mitochondrion 4.32 30.0
HORVU5Hr1G123390.2 Barley nucleus 21.58 29.28
TraesCS5D01G556100.1 Wheat nucleus 2.97 21.99
GSMUA_Achr3P22100_001 Banana extracellular, vacuole 2.78 14.8
GSMUA_Achr5P01220_001 Banana nucleus 3.6 13.74
GSMUA_Achr11P... Banana nucleus 3.79 13.39
Protein Annotations
Gene3D:1.20.920.10Gene3D:3.30.40.10MapMan:35.1InterPro:BromodomainInterPro:Bromodomain-like_sfncoils:Coil
InterPro:FYrich_NGO:GO:0000003GO:GO:0003674GO:GO:0003824GO:GO:0004402GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006355GO:GO:0006464GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009506GO:GO:0009628GO:GO:0009653GO:GO:0009791GO:GO:0009987GO:GO:0010223
GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016573GO:GO:0016740GO:GO:0019538
GO:GO:0042393GO:GO:0043966GO:GO:0043967GO:GO:0046872GO:GO:0048573EnsemblPlantsGene:GSMUA_Achr3G12190_001
EnsemblPlants:GSMUA_Achr3P12190_001EnsemblPlants:GSMUA_Achr3T12190_001InterPro:IPR001487InterPro:IPR001841InterPro:IPR003888InterPro:IPR013083
InterPro:IPR019787InterPro:IPR036427UniProt:M0SDY6PFAM:PF00439PFAM:PF00628PFAM:PF15612
ScanProsite:PS01359PFscan:PS50016PFscan:PS51542PANTHER:PTHR14140PANTHER:PTHR14140:SF29SMART:SM00184
SMART:SM00249SUPFAM:SSF47370SUPFAM:SSF57903TMHMM:TMhelixUniParc:UPI000296D7ACInterPro:WHIM1_dom
InterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-fingerInterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
PHD-finger domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G12190_001]
Coordinates
chr3:-:9023144..9042785
Molecular Weight (calculated)
232639.0 Da
IEP (calculated)
5.981
GRAVY (calculated)
-0.442
Length
2085 amino acids
Sequence
(BLAST)
0001: MDPAPATASK THEVRLAPLF IDLNEAPPPP CDTPPADPPS HGFSLDSRAL ACRFHASLAP APGPAADFPG EAGVGKLPLP CGVCGRPETR GGTVVCDGCE
0101: RGFHVGCVRN RLRYPAAAVD DWLCHECSAS GRPTKRWTLG AARLLDINAL PPSEGDVEEL QSSGNVGCRQ FFLHSFSPWL KDSSVSCLLF LFSYIIAFIF
0201: VYLRNLIIIL SPVTLLIEKI KHHFKSLRRS RDQKVACVSE AMEFYRCIVK GRKHIKNNAP NNLIIRSYKC RFALLICACD KITLIIVKNV NIFVYLSRVN
0301: NVDVANVSGS GQPFPQHVGQ IRNDCDSAKD TGSVDDFSRI TEGNFCSHYK LYWKRLVLSL SHYLFYSSIY CDSDGKRFGS GNDVAHYLGI KSSYTYVDIG
0401: EKSDVSGVVQ RSLPPRRRKR DLSRTWTATS SSENQESVRV NCSGEPSSDN EVMESQYSDF RRPSRVTNAY TEENNGHGSQ MLNGCLPVQY EDFFVICFGR
0501: IDLRLAYHNN CQIWPVGYRS VWHDRITGSI FECEVSDGGD AGPVFKVRRH PCSALPIPIG QTVLLYNNAN KCDASERTET NCVILESDLE KDDDIIMLLS
0601: DPSYSDLEQV SCFSSNLNQI SSSLADNGRP RLVDHLGTLA RFCSSAGPTN MPQVIQNHTE FDLSCQLVAE WLNQDRFGLD MGFVKEVIET FPESHACTGY
0701: QFLANRADFS KSMTVASGVI LAVQRNGDGS EDKVPSYGLY RRQMMLKQQD FAADHQLSDR QPPPGKPCSR RLPAELVGDV YQIWEFLWRF YGTLGLNEPP
0801: TLEELEEELI DPWPIDSKYM EKLEKEIEDF REPDGRISLS TCESGSTASE VSPFMFIPNE TASAREAAQA KLASRTYGRC TGVTLTKIHI SLLKILIGEI
0901: LGKVTVYLDP NSDARESRSR RGRKKDVENT VAVKEAKTEI LPANELTWPD LARRYILAVL SINFVMDSPD VFTREGLKLV RCLQGDGGVL CGSLSGVAGM
1001: EADAMLLADA ERQISDSRLQ ENKVLPVDQK DSDAVSTSEP AVVNGNNLPE WALPLEPVKK LPTNVGTRIR KCIYDALDRN PPEWAKKILE HSISKEVYKG
1101: NASGPTKKAV LSVLAEASGG KHQQKSEKRS KEKSPISLSD AVMKRCRIVL RRAVSADEGK VFCNLLGSPI ANVNDNEDEG VLGFPAMVSR PLDFRTIDLR
1201: LAVGAYGGSH EAFLEDVREV WHNISTAYGD RPDLMQLVET LSQKFESLYE KEVLILVEKI ADHVGNEPLD TEKRKELYNI ILAANEIPKA PWEEGVCKVC
1301: GIDKDDDSVL LCDSCDSEYH TYCLNPPLAR IPEGNWYCPS CIRIQSKKQD LDQHTEVTKR HMRRHLGEEG RAFQEALYQL ACTMDEREYW EYSVEERIFL
1401: LKFLCDEVLN TALVREHLDQ CTEKSNDLQQ KIRTLVMEWR NLKFKEELLA LSIAKESTSK FNEPGDVASE EGEANMYSGH GRLVEYQQNV NNSSVTDSGN
1501: RLKGASFIIE GCPGEDGRID FSKSVGQLFK SSVIDTHADG RKSQVQSGER DVLEERSVPG NLNPNTTNYI TMITGLVKTS GELLASKGVL QENADDVLVT
1601: SSEHESSDLG MSGLKNEISH IEESIFSFES QLMMSSLRRD FLGRDSFGRL YWVIGRPGRH PWLVADGILM RTGPGGSDAC STSTCDMHDR NFCSFSLYES
1701: DNEIQEITSW LSDADPKERE LKECILQWQR LVHQVTNHIS NSSQLTSKSS TSKNCTVAQS LTTKAMMILE AKYGPFLDPE VSEIPKRKGR KAKQNHERMY
1801: RCECLEAIWP SRHHCLSCHQ SFLTAVELEG HNDGRCTPNN PVSDESKEND DIIRVKGTRS ESTRGKENPD DVDFVDTGGK GISATQDETG KGTRQANISA
1901: HNFHGNVNDE QSQRTKKSNT GSGDGEEASS ITNKIQRSGR SCTVPESSLR PLVGKISEIL KCLKVNLLDM EAALPMEALR PSRSQMPKRC AWRGFVKSSE
2001: SIFEMVQATT LFEGMIKTEY LKNGWWYWSS QTAAAKTSTV ASLALRIYTL DDSIIYVKDQ VPGSDPTENL KQTTKTGKKR KDIEL
Best Arabidopsis Sequence Match ( AT3G01460.1 )
(BLAST)
0001: MEPTDSTNEQ LGDTKTAAVK EESRSFLGID LNEIPTGATL GGGCTAGQDD DGEYEPVEVV RSIHDNPDPA PGAPAEVPEP DRDASCGACG RPESIELVVV
0101: CDACERGFHM SCVNDGVEAA PSADWMCSDC RTGGERSKLW PLGVKSKLIL DMNASPPSDA EGYGAEETSD SRKHMLASSS CIGNSFDYAM MHSSFSSLGR
0201: GHASLEASGL MSRNTKMSMD ALGSHNLGFG FPLNLNNSSL PMRFPSLDPS ELFLQNLRHF ISERHGVLED GWRVEFRQPL NGYQLCAVYC APNGKTFSSI
0301: QEVACYLGLA INGNYSCMDA EIRNENSLLQ ERLHTPKRRK TSRWPNNGFP EQKGSSVSAQ LRRFPFNGQT MSPFAVKSGT HFQAGGSLSS GNNGCGCEEA
0401: KNGCPMQFED FFVLSLGRID IRQSYHNVNV IYPIGYKSCW HDKITGSLFT CEVSDGNSGP IFKVTRSPCS KSFIPAGSTV FSCPKIDEMV EQNSDKLSNR
0501: RDSTQERDDD ASVEILLSEH CPPLGDDILS CLREKSFSKT VNSLRSEVDS SRVDFDKNLS YDQDHGVEIG DIVVEEDSLS DAWKKVSQKL VDACSIVLKQ
0601: KGTLNFLCKH VDRETSEINW DTMNEKDNVI LSLSKFCCSL APCSVTCGEK DKSEFAAVVD ALSRWLDQNR FGLDADFVQE MIEHMPGAES CTNYRTLKSR
0701: SSSSVPITVA EGALVVKPKG GENVKDEVFG EISRKAKKPK LNGGHGVRNL HPPPGRPMCL RLPPGLVGDF LQVSEVFWRF HEILGFEEAF SPENLEQELI
0801: NPVFDGLFLD KPGKDDKRSE INFTDKDSTA TKLFSLFDES RQPFPAKNTS ASELKEKKAG DSSDFKISDS SRGSCVGALL TRAHISLLQV LICELQSKVA
0901: AFVDPNFDSG ESRSRRGRKK DDSTLSAKRN KLHMLPVNEF TWPELARRYI LSLLSMDGNL ESAEIAARES GKVFRCLQGD GGLLCGSLTG VAGMEADSML
1001: LAEAIKKISG SLTSENDVLS VEDDDSDGLD ATETNTCSGD IPEWAQVLEP VKKLPTNVGT RIRKCVYEAL ERNPPEWAKK ILEHSISKEI YKGNASGPTK
1101: KAVLSLLADI RGGDLVQRSI KGTKKRTYIS VSDVIMKKCR AVLRGVAAAD EDKVLCTLLG RKLLNSSDND DDGLLGSPAM VSRPLDFRTI DLRLAAGAYD
1201: GSTEAFLEDV LELWSSIRVM YADQPDCVDL VATLSEKFKS LYEAEVVPLV QKLKDYRKLE CLSAEMKKEI KDIVVSVNKL PKAPWDEGVC KVCGVDKDDD
1301: SVLLCDTCDA EYHTYCLNPP LIRIPDGNWY CPSCVIAKRM AQEALESYKL VRRRKGRKYQ GELTRASMEL TAHLADVMEE KDYWEFSAEE RILLLKLLCD
1401: ELLSSSLVHQ HLEQCAEAII EMQQKLRSLS SEWKNAKMRQ EFLTAKLAKV EPSILKEVGE PHNSSYFADQ MGCDPQPQEG VGDGVTRDDE TSSTAYLNKN
1501: QGKSPLETDT QPGESHVNFG ESKISSPETI SSPGRHELPI ADTSPLVTDN LPEKDTSETL LKSVGRNHET HSPNSNAVEL PTAHDASSQA SQELQACQQD
1601: LSATSNEIQN LQQSIRSIES QLLKQSIRRD FLGTDASGRL YWGCCFPDEN PRILVDGSIS LQKPVQADLI GSKVPSPFLH TVDHGRLRLS PWTYYETETE
1701: ISELVQWLHD DDLKERDLRE SILWWKRLRY GDVQKEKKQA QNLSAPVFAT GLETKAAMSM EKRYGPCIKL EMETLKKRGK KTKVAEREKL CRCECLESIL
1801: PSMIHCLICH KTFASDDEFE DHTESKCIPY SLATEEGKDI SDSSKAKESL KSDYLNVKSS AGKDVAEISN VSELDSGLIR YQEEESISPY HFEEICSKFV
1901: TKDCNRDLVK EIGLISSNGI PTFLPSSSTH LNDSVLISAK SNKPDGGDSG DQVIFAGPET NVEGLNSESN MSFDRSVTDS HGGPLDKPSG LGFGFSEQKN
2001: KKSSGSGLKS CCVVPQAALK RVTGKALPGF RFLKTNLLDM DVALPEEALR PSKSHPNRRR AWRVFVKSSQ SIYELVQATI VVEDMIKTEY LKNEWWYWSS
2101: LSAAAKISTL SALSVRIFSL DAAIIYDKPI TPSNPIDETK PIISLPDQKS QPVSDSQERS SRVRRSGKKR KEPEGS
Arabidopsis Description
MBD9MBD9 [Source:UniProtKB/TrEMBL;Acc:A0A178VJY9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.