Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01867 | Sorghum | nucleus | 16.07 | 36.21 |
| PGSC0003DMT400046398 | Potato | nucleus | 25.26 | 34.26 |
| Zm00001d042613_P001 | Maize | cytosol | 15.82 | 34.07 |
| GSMUA_Achr5P01220_001 | Banana | nucleus | 45.15 | 32.42 |
| Os01t0883400-00 | Rice | extracellular | 18.11 | 32.13 |
| GSMUA_Achr11P... | Banana | nucleus | 46.68 | 31.02 |
| CDX98073 | Canola | cytosol | 22.45 | 30.66 |
| Bra019757.1-P | Field mustard | cytosol | 22.45 | 30.66 |
| CDX68064 | Canola | nucleus | 25.51 | 21.64 |
| Bra003689.1-P | Field mustard | nucleus | 25.51 | 21.64 |
| TraesCS7B01G225200.1 | Wheat | nucleus, plastid | 30.87 | 21.57 |
| TraesCS7D01G321100.1 | Wheat | nucleus, plastid | 30.87 | 21.49 |
| TraesCS7A01G324700.2 | Wheat | nucleus, plastid | 30.87 | 21.42 |
| HORVU7Hr1G077650.5 | Barley | nucleus, plastid | 30.61 | 21.35 |
| CDX87531 | Canola | nucleus | 26.28 | 20.81 |
| Zm00001d035008_P001 | Maize | nucleus, plastid | 29.34 | 20.72 |
| AT1G77250.1 | Thale cress | nucleus | 27.55 | 20.69 |
| Bra015682.1-P | Field mustard | nucleus | 26.02 | 20.61 |
| CDX79193 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 25.77 | 20.28 |
| CDX88353 | Canola | nucleus | 24.74 | 20.12 |
| Zm00001d049736_P001 | Maize | nucleus, plastid | 28.57 | 20.07 |
| Os08t0105000-01 | Rice | nucleus | 28.32 | 19.72 |
| KXG24174 | Sorghum | nucleus | 27.55 | 19.6 |
| VIT_18s0001g01580.t01 | Wine grape | nucleus | 30.61 | 19.17 |
| Solyc04g058190.2.1 | Tomato | nucleus | 27.81 | 18.08 |
| KRH53317 | Soybean | nucleus | 27.81 | 16.87 |
| KRH18055 | Soybean | nucleus | 27.3 | 13.32 |
| KRH16456 | Soybean | nucleus | 27.04 | 13.2 |
| TraesCS3B01G231800.2 | Wheat | nucleus | 31.38 | 11.37 |
| TraesCS3D01G202300.1 | Wheat | nucleus, plasma membrane | 31.38 | 11.35 |
| KXG32724 | Sorghum | nucleus | 30.87 | 10.08 |
| Zm00001d011158_P001 | Maize | nucleus | 29.59 | 9.81 |
| GSMUA_Achr3P12190_001 | Banana | nucleus | 14.8 | 2.78 |
| TraesCSU01G205800.1 | Wheat | cytosol, nucleus, plastid | 5.61 | 2.68 |
| Os01t0547200-01 | Rice | nucleus | 0.51 | 0.22 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P22100_001 | EnsemblPlants:GSMUA_Achr3T22100_001 | EnsemblPlantsGene:GSMUA_Achr3G22100_001 | Gene3D:2.30.30.1150 | Gene3D:3.30.40.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR10615 | PANTHER:PTHR10615:SF158 | PFAM:PF00628 | PFscan:PS50016 |
| SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI000295FC72 | UniProt:M0SGS6 | MapMan:35.1 | : |
Description
Putative Histone-lysine N-methyltransferase MLL2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G22100_001]
Coordinates
chr3:+:23018589..23020098
Molecular Weight (calculated)
44675.6 Da
IEP (calculated)
7.047
GRAVY (calculated)
-0.310
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFTFEVLPG NLMFVYLKLL HTLYVLQVWD KCQKFGEEMV LLASNLSSMS HVSCQKHVKH CYPFLLSSEL WILPVTLAGF AESNKTAMHL TFCESGQYTK
101: LDQAKASPLY KVPTCRQCAM EANGECSLIC GGCQAMYHFS CIKPALVEIP TQSWYCVVCN AYEKESPEPF SICTRKDIMH KNHLVYDGLK TSGTQEYCID
201: SDSRIVRASN STESSVSFME TDESPELPRT AQSFLCKICG TCEDEDKKFL ICDHVHCPYK FYHIRCLKSS QIASLQQQKK SCWYCPSCLC RACFCDKDDD
301: RIVLCDGCDE AYHTYCMRPP CTSIPKGQWY CQSCNASMER KGTKRHKQRI TQQHWKNDGT QFNEVSRAVD LLLIAAEKLS SEEQLMAGEN SR
101: LDQAKASPLY KVPTCRQCAM EANGECSLIC GGCQAMYHFS CIKPALVEIP TQSWYCVVCN AYEKESPEPF SICTRKDIMH KNHLVYDGLK TSGTQEYCID
201: SDSRIVRASN STESSVSFME TDESPELPRT AQSFLCKICG TCEDEDKKFL ICDHVHCPYK FYHIRCLKSS QIASLQQQKK SCWYCPSCLC RACFCDKDDD
301: RIVLCDGCDE AYHTYCMRPP CTSIPKGQWY CQSCNASMER KGTKRHKQRI TQQHWKNDGT QFNEVSRAVD LLLIAAEKLS SEEQLMAGEN SR
001: MFMEEATSNG KGTEHNQPNG LVESEALNNW SAGCGAMANS ANASSRDSKK IQTYKRRKLG RSYSANKCSE NDRFSMEGVS HSESRESVSY ERFSIRTHLT
101: GELPKPPSPN KPSSESTNHE TVTAGCQHVL SHVLASKEFA SLNRLLSENL QGVKIDDFTS RTLIDTRMKE GVYEGSPLLF STDLQEVWQK MQDVGNDMAV
201: LANSLLELSR TSYKEQLKQF YTGESKPCPN AENIRNDSVS DICKLCGEKA EARDCLACDH CEDMYHVSCA QPGGKGMPTH SWYCLDCTSK GIGSPHENCV
301: VCEKMKTQGM MKTDNRSVDT STECKEDSNE SEENSSCNMN HEVHHVEMSR DSELCRTCGT KVDSGGKYIT CDHPFCPHKY YHIRCLTSRQ IKLHGVRWYC
401: SSCLCRNCLT DKDDDKIVLC DGCDDAYHIY CMRPPCESVP NGEWFCTACK AAILKVQKAR KAFEKKMETV QKQKGIKPKN LQGKPQSKDN GELDQSVGGM
501: DMLLNAADTL KDEEQMTFQS IK
101: GELPKPPSPN KPSSESTNHE TVTAGCQHVL SHVLASKEFA SLNRLLSENL QGVKIDDFTS RTLIDTRMKE GVYEGSPLLF STDLQEVWQK MQDVGNDMAV
201: LANSLLELSR TSYKEQLKQF YTGESKPCPN AENIRNDSVS DICKLCGEKA EARDCLACDH CEDMYHVSCA QPGGKGMPTH SWYCLDCTSK GIGSPHENCV
301: VCEKMKTQGM MKTDNRSVDT STECKEDSNE SEENSSCNMN HEVHHVEMSR DSELCRTCGT KVDSGGKYIT CDHPFCPHKY YHIRCLTSRQ IKLHGVRWYC
401: SSCLCRNCLT DKDDDKIVLC DGCDDAYHIY CMRPPCESVP NGEWFCTACK AAILKVQKAR KAFEKKMETV QKQKGIKPKN LQGKPQSKDN GELDQSVGGM
501: DMLLNAADTL KDEEQMTFQS IK
Arabidopsis Description
At1g77250 [Source:UniProtKB/TrEMBL;Acc:Q1JPM3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.