Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003689.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX98073 | Canola | cytosol | 61.26 | 98.61 |
| CDX79193 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 75.97 | 70.48 |
| AT1G77250.1 | Thale cress | nucleus | 60.39 | 53.45 |
| CDX87531 | Canola | nucleus | 55.63 | 51.92 |
| CDX88353 | Canola | nucleus | 53.68 | 51.45 |
| PGSC0003DMT400046398 | Potato | nucleus | 24.68 | 39.45 |
| EES01867 | Sorghum | nucleus | 12.99 | 34.48 |
| Zm00001d042613_P001 | Maize | cytosol | 12.99 | 32.97 |
| Os01t0883400-00 | Rice | extracellular | 13.85 | 28.96 |
| GSMUA_Achr5P01220_001 | Banana | nucleus | 30.3 | 25.64 |
| GSMUA_Achr3P22100_001 | Banana | extracellular, vacuole | 21.64 | 25.51 |
| Solyc04g058190.2.1 | Tomato | nucleus | 32.68 | 25.04 |
| KRH53317 | Soybean | nucleus | 34.42 | 24.61 |
| GSMUA_Achr11P... | Banana | nucleus | 30.95 | 24.24 |
| VIT_18s0001g01580.t01 | Wine grape | nucleus | 31.6 | 23.32 |
| Zm00001d049736_P001 | Maize | nucleus, plastid | 27.06 | 22.4 |
| Zm00001d035008_P001 | Maize | nucleus, plastid | 26.84 | 22.34 |
| KXG24174 | Sorghum | nucleus | 25.97 | 21.78 |
| Os08t0105000-01 | Rice | nucleus | 25.76 | 21.14 |
| HORVU7Hr1G077650.5 | Barley | nucleus, plastid | 25.11 | 20.64 |
| TraesCS7B01G225200.1 | Wheat | nucleus, plastid | 24.46 | 20.14 |
| TraesCS7D01G321100.1 | Wheat | nucleus, plastid | 24.46 | 20.07 |
| TraesCS7A01G324700.2 | Wheat | nucleus, plastid | 24.46 | 20.0 |
| KRH18055 | Soybean | nucleus | 34.42 | 19.8 |
| KRH16456 | Soybean | nucleus | 33.98 | 19.55 |
| TraesCS3D01G202300.1 | Wheat | nucleus, plasma membrane | 26.84 | 11.44 |
| TraesCS3B01G231800.2 | Wheat | nucleus | 25.97 | 11.09 |
| KXG32724 | Sorghum | nucleus | 26.84 | 10.33 |
| Zm00001d011158_P001 | Maize | nucleus | 25.97 | 10.14 |
| CDY49055 | Canola | nucleus | 16.88 | 3.65 |
| CDY37520 | Canola | nucleus | 16.67 | 3.59 |
| CDY28674 | Canola | nucleus | 16.67 | 3.52 |
| Os01t0547200-01 | Rice | nucleus | 6.06 | 3.15 |
| TraesCSU01G205800.1 | Wheat | cytosol, nucleus, plastid | 4.98 | 2.8 |
Protein Annotations
| Gene3D:2.30.30.1150 | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078BW97 | EnsemblPlants:CDX68064 | ProteinID:CDX68064 |
| ProteinID:CDX68064.1 | EnsemblPlantsGene:GSBRNA2T00099297001 | InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 | ScanProsite:PS01359 |
| PFscan:PS50016 | PANTHER:PTHR10615 | PANTHER:PTHR10615:SF158 | SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI00025414DE |
| InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaA07g21040D
Coordinates
chrLK031787:+:3658955..3661093
Molecular Weight (calculated)
50939.0 Da
IEP (calculated)
7.125
GRAVY (calculated)
-0.694
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSNGEGTEK CNGVNSCGGG ANERSRGNKK LQVYKRRKLG RRSVSGSKCK EDERVSVEAG VSHSGSQESV ASELDNQTGE LPELPNPNKP TTEPKYETVT
101: AGCQNVLSQV LASKEFASLS KLLSEVKIED LTCRTLIDTR MQEGVYEGSP KLFSTDLQED VGNDMAVLGN SLLELSKTFS TEQLKKFYTR ELKPNPNAEN
201: IRNNCVYDTC KLCGEKAAVT DCLACDHCED MYHVSCAHPG GKGMSTGSWY CINCTANGIG SPHENCVVCE RMKTDSRRVD KSTECKEDSN ESEENSSCNI
301: NHGGHKVEVK RDSELCRTCG TKVVENGRFI TCDHPFCPHK YYHIRCLTAK LVKLHGGARW YCSSCLCRNC LTDKDDDKIV MCDGCDDAYH IYCMKPPRAS
401: VPDEEWFCKT CNAASQKVRK VRKAYEKKMG TLQKQNGNLK SSGDSVGGGV DMLLNAADTL KD
101: AGCQNVLSQV LASKEFASLS KLLSEVKIED LTCRTLIDTR MQEGVYEGSP KLFSTDLQED VGNDMAVLGN SLLELSKTFS TEQLKKFYTR ELKPNPNAEN
201: IRNNCVYDTC KLCGEKAAVT DCLACDHCED MYHVSCAHPG GKGMSTGSWY CINCTANGIG SPHENCVVCE RMKTDSRRVD KSTECKEDSN ESEENSSCNI
301: NHGGHKVEVK RDSELCRTCG TKVVENGRFI TCDHPFCPHK YYHIRCLTAK LVKLHGGARW YCSSCLCRNC LTDKDDDKIV MCDGCDDAYH IYCMKPPRAS
401: VPDEEWFCKT CNAASQKVRK VRKAYEKKMG TLQKQNGNLK SSGDSVGGGV DMLLNAADTL KD
001: MFMEEATSNG KGTEHNQPNG LVESEALNNW SAGCGAMANS ANASSRDSKK IQTYKRRKLG RSYSANKCSE NDRFSMEGVS HSESRESVSY ERFSIRTHLT
101: GELPKPPSPN KPSSESTNHE TVTAGCQHVL SHVLASKEFA SLNRLLSENL QGVKIDDFTS RTLIDTRMKE GVYEGSPLLF STDLQEVWQK MQDVGNDMAV
201: LANSLLELSR TSYKEQLKQF YTGESKPCPN AENIRNDSVS DICKLCGEKA EARDCLACDH CEDMYHVSCA QPGGKGMPTH SWYCLDCTSK GIGSPHENCV
301: VCEKMKTQGM MKTDNRSVDT STECKEDSNE SEENSSCNMN HEVHHVEMSR DSELCRTCGT KVDSGGKYIT CDHPFCPHKY YHIRCLTSRQ IKLHGVRWYC
401: SSCLCRNCLT DKDDDKIVLC DGCDDAYHIY CMRPPCESVP NGEWFCTACK AAILKVQKAR KAFEKKMETV QKQKGIKPKN LQGKPQSKDN GELDQSVGGM
501: DMLLNAADTL KDEEQMTFQS IK
101: GELPKPPSPN KPSSESTNHE TVTAGCQHVL SHVLASKEFA SLNRLLSENL QGVKIDDFTS RTLIDTRMKE GVYEGSPLLF STDLQEVWQK MQDVGNDMAV
201: LANSLLELSR TSYKEQLKQF YTGESKPCPN AENIRNDSVS DICKLCGEKA EARDCLACDH CEDMYHVSCA QPGGKGMPTH SWYCLDCTSK GIGSPHENCV
301: VCEKMKTQGM MKTDNRSVDT STECKEDSNE SEENSSCNMN HEVHHVEMSR DSELCRTCGT KVDSGGKYIT CDHPFCPHKY YHIRCLTSRQ IKLHGVRWYC
401: SSCLCRNCLT DKDDDKIVLC DGCDDAYHIY CMRPPCESVP NGEWFCTACK AAILKVQKAR KAFEKKMETV QKQKGIKPKN LQGKPQSKDN GELDQSVGGM
501: DMLLNAADTL KDEEQMTFQS IK
Arabidopsis Description
At1g77250 [Source:UniProtKB/TrEMBL;Acc:Q1JPM3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.