Factsheet for HORVU7Hr1G077650.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

nucleus 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G225200.1	Wheat	nucleus, plastid	94.31	94.47
TraesCS7D01G321100.1	Wheat	nucleus, plastid	91.64	91.47
TraesCS7A01G324700.2	Wheat	nucleus, plastid	91.64	91.15
Os08t0105000-01	Rice	nucleus	52.49	52.4
Zm00001d035008_P001	Maize	nucleus, plastid	44.66	45.23
Zm00001d049736_P001	Maize	nucleus, plastid	44.66	44.98
KXG24174	Sorghum	nucleus	43.06	43.92
GSMUA_Achr5P01220_001	Banana	nucleus	36.12	37.18
GSMUA_Achr11P...	Banana	nucleus	35.05	33.39
GSMUA_Achr3P22100_001	Banana	extracellular, vacuole	21.35	30.61
PGSC0003DMT400046398	Potato	nucleus	14.23	27.68
CDX98073	Canola	cytosol	13.88	27.18
Bra019757.1-P	Field mustard	cytosol	13.88	27.18
Bra015682.1-P	Field mustard	nucleus	22.78	25.86
CDX87531	Canola	nucleus	22.6	25.66
CDX88353	Canola	nucleus	21.89	25.52
Bra003689.1-P	Field mustard	nucleus	20.64	25.11
CDX68064	Canola	nucleus	20.64	25.11
CDX79193	Canola	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	21.35	24.1
Solyc04g058190.2.1	Tomato	nucleus	25.09	23.38
AT1G77250.1	Thale cress	nucleus	21.35	22.99
VIT_18s0001g01580.t01	Wine grape	nucleus	24.38	21.89
KRH53317	Soybean	nucleus	23.67	20.59
KRH18055	Soybean	nucleus	23.31	16.31
KRH16456	Soybean	nucleus	22.95	16.06
HORVU5Hr1G123360.1	Barley	cytosol, nucleus	1.42	6.72
HORVU5Hr1G123350.3	Barley	cytosol	9.96	6.31
HORVU6Hr1G034680.3	Barley	nucleus	17.08	4.58
TraesCSU01G205800.1	Wheat	cytosol, nucleus, plastid	5.52	3.78
HORVU5Hr1G123390.2	Barley	nucleus	10.32	3.77

Protein Annotations

Gene3D:2.30.30.1150	Gene3D:3.30.40.10	MapMan:35.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007275	GO:GO:0008150
GO:GO:0009628	GO:GO:0009791	GO:GO:0046872	GO:GO:0048586	EnsemblPlantsGene:HORVU7Hr1G077650	EnsemblPlants:HORVU7Hr1G077650.5
InterPro:IPR013083	InterPro:IPR019787	UniProt:M0UKX8	PFAM:PF00628	PFscan:PS50016	PANTHER:PTHR10615
PANTHER:PTHR10615:SF123	SMART:SM00249	SUPFAM:SSF57903	UniParc:UPI00029503E1	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD
InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:456224707..456318669

Molecular Weight (calculated)

61478.7 Da

IEP (calculated)

6.861

GRAVY (calculated)

-0.511

Length

562 amino acids

Sequence
(BLAST)

001: MTSQDAAAPP LASPKRPAPG EQPSPEVLVT YKRRRTAACG ATSDPGAPCA TIVPCSGSSG QDGHHMLPRH WITWRDTLEG FLQSPGVNKG GGIQSCIQDA
101: LRYNCCQSVQ KGDLNKGQGA SEEHPAGVAG AKEISSSIAL KDATAASLDA NTAMCNNALL DIFVSEKFAL LCDLLVGTFH VSKVHEVIDL GKIDTNMRNG
201: NYARNPALFN DHIQQIWEKF EQVGREMTSL ASNLPIISRA SYQKQASGVS EVEVAAEHRI IEETSLGGFV QKIPKDSNTT TQFSPCDSGH STIPKRSGTC
301: GLGRTCTCKQ CGTSAEEEKS LICDGCDTTY HFDCVKRLHP AMTQIPDNWH CPACSNNKGK GKAAGTKKNV HDSLHGDCPL CDKLEVVKKV EPPEVASGIE
401: VVDEREGSSV PSVEEENEPD LYTTALSKLC KNCGTCEDDD KQFLVCGHPY CPYKFYHIRC LRTSQIALEK QKNLECWYCP SCLCRGCFKN KDDEEITLCD
501: GCDEAYHVYC MTPKRTCVPK GHWYCPLCSV RRAREGMQRY EKSILNKQQH IGAKRASQPD NA

Best Arabidopsis Sequence Match ( AT1G77250.1 )
(BLAST)

001: MFMEEATSNG KGTEHNQPNG LVESEALNNW SAGCGAMANS ANASSRDSKK IQTYKRRKLG RSYSANKCSE NDRFSMEGVS HSESRESVSY ERFSIRTHLT
101: GELPKPPSPN KPSSESTNHE TVTAGCQHVL SHVLASKEFA SLNRLLSENL QGVKIDDFTS RTLIDTRMKE GVYEGSPLLF STDLQEVWQK MQDVGNDMAV
201: LANSLLELSR TSYKEQLKQF YTGESKPCPN AENIRNDSVS DICKLCGEKA EARDCLACDH CEDMYHVSCA QPGGKGMPTH SWYCLDCTSK GIGSPHENCV
301: VCEKMKTQGM MKTDNRSVDT STECKEDSNE SEENSSCNMN HEVHHVEMSR DSELCRTCGT KVDSGGKYIT CDHPFCPHKY YHIRCLTSRQ IKLHGVRWYC
401: SSCLCRNCLT DKDDDKIVLC DGCDDAYHIY CMRPPCESVP NGEWFCTACK AAILKVQKAR KAFEKKMETV QKQKGIKPKN LQGKPQSKDN GELDQSVGGM
501: DMLLNAADTL KDEEQMTFQS IK

Arabidopsis Description

At1g77250 [Source:UniProtKB/TrEMBL;Acc:Q1JPM3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.