CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16456	Soybean	nucleus	80.45	80.45
KRH53317	Soybean	nucleus	44.46	55.26
PGSC0003DMT400046398	Potato	nucleus	16.94	47.06
Bra019757.1-P	Field mustard	cytosol	14.45	40.42
CDX98073	Canola	cytosol	14.45	40.42
VIT_18s0001g01580.t01	Wine grape	nucleus	30.01	38.5
Solyc04g058190.2.1	Tomato	nucleus	27.27	36.32
CDX88353	Canola	nucleus	21.79	36.31
CDX87531	Canola	nucleus	22.29	36.16
Bra015682.1-P	Field mustard	nucleus	22.17	35.96
Bra003689.1-P	Field mustard	nucleus	19.8	34.42
CDX68064	Canola	nucleus	19.8	34.42
AT1G77250.1	Thale cress	nucleus	22.04	33.91
CDX79193	Canola	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	20.42	32.93
EES01867	Sorghum	nucleus	7.1	32.76
GSMUA_Achr5P01220_001	Banana	nucleus	21.42	31.5
Zm00001d042613_P001	Maize	cytosol	6.85	30.22
GSMUA_Achr11P...	Banana	nucleus	21.05	28.64
GSMUA_Achr3P22100_001	Banana	extracellular, vacuole	13.32	27.3
Zm00001d049736_P001	Maize	nucleus, plastid	17.43	25.09
Zm00001d035008_P001	Maize	nucleus, plastid	17.31	25.05
Os08t0105000-01	Rice	nucleus	17.56	25.04
Os01t0883400-00	Rice	extracellular	6.6	23.98
TraesCS7B01G225200.1	Wheat	nucleus, plastid	16.69	23.89
KXG24174	Sorghum	nucleus	16.19	23.59
TraesCS7D01G321100.1	Wheat	nucleus, plastid	16.44	23.45
TraesCS7A01G324700.2	Wheat	nucleus, plastid	16.44	23.36
HORVU7Hr1G077650.5	Barley	nucleus, plastid	16.31	23.31
TraesCS3D01G202300.1	Wheat	nucleus, plasma membrane	19.43	14.39
TraesCS3B01G231800.2	Wheat	nucleus	18.8	13.96
Zm00001d011158_P001	Maize	nucleus	17.93	12.17
KXG32724	Sorghum	nucleus	17.81	11.92
TraesCSU01G205800.1	Wheat	cytosol, nucleus, plastid	5.6	5.49
Os01t0547200-01	Rice	nucleus	5.85	5.29
KRG93338	Soybean	nucleus	12.58	4.64
KRH20317	Soybean	nucleus	12.58	4.59

Protein Annotations

EntrezGene:100786712	Gene3D:2.30.30.1150	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02008024	EnsemblPlantsGene:GLYMA_13G035400
GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR013083	InterPro:IPR019787	UniProt:K7LY35
EnsemblPlants:KRH18055	ProteinID:KRH18055	ProteinID:KRH18055.1	ProteinID:KRH18056.1	PFAM:PF00628	ScanProsite:PS01359
PFscan:PS50016	PANTHER:PTHR10615	PANTHER:PTHR10615:SF158	SMART:SM00249	SUPFAM:SSF57903	UniParc:UPI000295AD33
InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:10967688..10986565

Molecular Weight (calculated)

87429.3 Da

IEP (calculated)

4.817

GRAVY (calculated)

-0.500

Length

803 amino acids

Sequence
(BLAST)

001: MEAEEGSSNG DNGEGVGLDW RLGSQDGDNG GRILGGNGVA EGEGDRGLKD GAVNNGVAIE AEEVWGLKKE AVDNGVAVVG GDGVVEGEEV RGLKNVTVNN
101: GMAIEGGNGV AEGKVWALKN EVINSGVAIA DGNGAAEDGE VSGSKNDVIG VAIADGNGFA EHGEVWGSKN EAVSNEVPFV DGNCVVYSGE VQGSKNGAVN
201: NEVVIADEIG VTEGQEDHCL QNGTVDNVVA NANEGNSGSV ECFQTYKRRK HVKLSSEFEV QENSRKHMAA ASQLSEQAVK KPFDLAVGNT SKDHSHDHWG
301: NVVLKQLYHS LGNDNGGMEW CIREALMSHP KISCATTMTE TLNIVKDGQE CSPQLESLFY RLQSEANGHE NVVNNGFSSE SNGHGATGRC QRVFRDILAS
401: EKFSSLCKVL LENFRGMKPE TVFDFSLINS RMKGQAYEQS PTLFLSDFQQ VWRKLQNTGN QIVAMARSLS NMSKASFCEQ VGISAQSSFE DEKQVLCNQE
501: SISHMKPEQT VECVAFKVGN CWHCGDKADG IDCLVCDSCE EMYHLSCIEP AVKEIPRKSW FCANCTANGI GCRHKNCVVC EQLNVLKTLD DFVGEENFPT
601: NEETLNELEE YSNCTYDGIQ VSTDGRNSSN CKICKMAVDG EKVKICGHSF CPSKYYHVRC LSSKQLKSYG NCWYCPSCIC QVCLTDKDDD KIVLCDGCDH
701: AYHIYCMKPP QNSIPKGKWF CIKCEAGIQA IRQARKAYES KKGKVGQNDS KPNEDIDKKW NKKRGRESDK VGGMMDMLIN AANTLNSEED MNAMLIDSKK
801: TLT

Best Arabidopsis Sequence Match ( AT3G01460.1 )
(BLAST)

0001: MEPTDSTNEQ LGDTKTAAVK EESRSFLGID LNEIPTGATL GGGCTAGQDD DGEYEPVEVV RSIHDNPDPA PGAPAEVPEP DRDASCGACG RPESIELVVV
0101: CDACERGFHM SCVNDGVEAA PSADWMCSDC RTGGERSKLW PLGVKSKLIL DMNASPPSDA EGYGAEETSD SRKHMLASSS CIGNSFDYAM MHSSFSSLGR
0201: GHASLEASGL MSRNTKMSMD ALGSHNLGFG FPLNLNNSSL PMRFPSLDPS ELFLQNLRHF ISERHGVLED GWRVEFRQPL NGYQLCAVYC APNGKTFSSI
0301: QEVACYLGLA INGNYSCMDA EIRNENSLLQ ERLHTPKRRK TSRWPNNGFP EQKGSSVSAQ LRRFPFNGQT MSPFAVKSGT HFQAGGSLSS GNNGCGCEEA
0401: KNGCPMQFED FFVLSLGRID IRQSYHNVNV IYPIGYKSCW HDKITGSLFT CEVSDGNSGP IFKVTRSPCS KSFIPAGSTV FSCPKIDEMV EQNSDKLSNR
0501: RDSTQERDDD ASVEILLSEH CPPLGDDILS CLREKSFSKT VNSLRSEVDS SRVDFDKNLS YDQDHGVEIG DIVVEEDSLS DAWKKVSQKL VDACSIVLKQ
0601: KGTLNFLCKH VDRETSEINW DTMNEKDNVI LSLSKFCCSL APCSVTCGEK DKSEFAAVVD ALSRWLDQNR FGLDADFVQE MIEHMPGAES CTNYRTLKSR
0701: SSSSVPITVA EGALVVKPKG GENVKDEVFG EISRKAKKPK LNGGHGVRNL HPPPGRPMCL RLPPGLVGDF LQVSEVFWRF HEILGFEEAF SPENLEQELI
0801: NPVFDGLFLD KPGKDDKRSE INFTDKDSTA TKLFSLFDES RQPFPAKNTS ASELKEKKAG DSSDFKISDS SRGSCVGALL TRAHISLLQV LICELQSKVA
0901: AFVDPNFDSG ESRSRRGRKK DDSTLSAKRN KLHMLPVNEF TWPELARRYI LSLLSMDGNL ESAEIAARES GKVFRCLQGD GGLLCGSLTG VAGMEADSML
1001: LAEAIKKISG SLTSENDVLS VEDDDSDGLD ATETNTCSGD IPEWAQVLEP VKKLPTNVGT RIRKCVYEAL ERNPPEWAKK ILEHSISKEI YKGNASGPTK
1101: KAVLSLLADI RGGDLVQRSI KGTKKRTYIS VSDVIMKKCR AVLRGVAAAD EDKVLCTLLG RKLLNSSDND DDGLLGSPAM VSRPLDFRTI DLRLAAGAYD
1201: GSTEAFLEDV LELWSSIRVM YADQPDCVDL VATLSEKFKS LYEAEVVPLV QKLKDYRKLE CLSAEMKKEI KDIVVSVNKL PKAPWDEGVC KVCGVDKDDD
1301: SVLLCDTCDA EYHTYCLNPP LIRIPDGNWY CPSCVIAKRM AQEALESYKL VRRRKGRKYQ GELTRASMEL TAHLADVMEE KDYWEFSAEE RILLLKLLCD
1401: ELLSSSLVHQ HLEQCAEAII EMQQKLRSLS SEWKNAKMRQ EFLTAKLAKV EPSILKEVGE PHNSSYFADQ MGCDPQPQEG VGDGVTRDDE TSSTAYLNKN
1501: QGKSPLETDT QPGESHVNFG ESKISSPETI SSPGRHELPI ADTSPLVTDN LPEKDTSETL LKSVGRNHET HSPNSNAVEL PTAHDASSQA SQELQACQQD
1601: LSATSNEIQN LQQSIRSIES QLLKQSIRRD FLGTDASGRL YWGCCFPDEN PRILVDGSIS LQKPVQADLI GSKVPSPFLH TVDHGRLRLS PWTYYETETE
1701: ISELVQWLHD DDLKERDLRE SILWWKRLRY GDVQKEKKQA QNLSAPVFAT GLETKAAMSM EKRYGPCIKL EMETLKKRGK KTKVAEREKL CRCECLESIL
1801: PSMIHCLICH KTFASDDEFE DHTESKCIPY SLATEEGKDI SDSSKAKESL KSDYLNVKSS AGKDVAEISN VSELDSGLIR YQEEESISPY HFEEICSKFV
1901: TKDCNRDLVK EIGLISSNGI PTFLPSSSTH LNDSVLISAK SNKPDGGDSG DQVIFAGPET NVEGLNSESN MSFDRSVTDS HGGPLDKPSG LGFGFSEQKN
2001: KKSSGSGLKS CCVVPQAALK RVTGKALPGF RFLKTNLLDM DVALPEEALR PSKSHPNRRR AWRVFVKSSQ SIYELVQATI VVEDMIKTEY LKNEWWYWSS
2101: LSAAAKISTL SALSVRIFSL DAAIIYDKPI TPSNPIDETK PIISLPDQKS QPVSDSQERS SRVRRSGKKR KEPEGS

Arabidopsis Description

MBD9MBD9 [Source:UniProtKB/TrEMBL;Acc:A0A178VJY9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.