Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G538100.1 | Wheat | nucleus | 85.12 | 78.69 |
| VIT_18s0122g00570.t01 | Wine grape | extracellular | 1.22 | 11.76 |
| VIT_03s0017g01050.t01 | Wine grape | endoplasmic reticulum, nucleus, vacuole | 0.85 | 8.05 |
| Os01t0883400-00 | Rice | extracellular | 2.07 | 7.69 |
| EES01867 | Sorghum | nucleus | 1.59 | 7.47 |
| Os01t0547200-01 | Rice | nucleus | 7.44 | 6.86 |
| Zm00001d042613_P001 | Maize | cytosol | 1.34 | 6.04 |
| AT1G77250.1 | Thale cress | nucleus | 3.78 | 5.94 |
| Solyc04g058190.2.1 | Tomato | nucleus | 4.27 | 5.8 |
| TraesCS7D01G321100.1 | Wheat | nucleus, plastid | 3.9 | 5.68 |
| TraesCS7A01G324700.2 | Wheat | nucleus, plastid | 3.9 | 5.66 |
| Bra015682.1-P | Field mustard | nucleus | 3.41 | 5.66 |
| GSMUA_Achr3P22100_001 | Banana | extracellular, vacuole | 2.68 | 5.61 |
| KRH18055 | Soybean | nucleus | 5.49 | 5.6 |
| KRH16456 | Soybean | nucleus | 5.49 | 5.6 |
| CDX98073 | Canola | cytosol | 1.95 | 5.57 |
| Bra019757.1-P | Field mustard | cytosol | 1.95 | 5.57 |
| KRH53317 | Soybean | nucleus | 4.39 | 5.57 |
| PGSC0003DMT400046398 | Potato | nucleus | 1.95 | 5.54 |
| HORVU7Hr1G077650.5 | Barley | nucleus, plastid | 3.78 | 5.52 |
| CDX87531 | Canola | nucleus | 3.29 | 5.45 |
| CDX88353 | Canola | nucleus | 3.17 | 5.39 |
| CDX79193 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 3.17 | 5.22 |
| TraesCS3D01G202300.1 | Wheat | nucleus, plasma membrane | 6.59 | 4.98 |
| CDX68064 | Canola | nucleus | 2.8 | 4.98 |
| Bra003689.1-P | Field mustard | nucleus | 2.8 | 4.98 |
| KXG32724 | Sorghum | nucleus | 6.95 | 4.75 |
| GSMUA_Achr11P... | Banana | nucleus | 3.29 | 4.58 |
| Zm00001d035008_P001 | Maize | nucleus, plastid | 3.05 | 4.5 |
| Zm00001d049736_P001 | Maize | nucleus, plastid | 3.05 | 4.48 |
| Zm00001d011158_P001 | Maize | nucleus | 6.46 | 4.48 |
| Os08t0105000-01 | Rice | nucleus | 3.05 | 4.44 |
| KXG24174 | Sorghum | nucleus | 2.56 | 3.81 |
| GSMUA_Achr5P01220_001 | Banana | nucleus | 2.2 | 3.3 |
Protein Annotations
| EnsemblPlants:TraesCSU01G205800.1 | EnsemblPlantsGene:TraesCSU01G205800 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:FYrich_C | InterPro:FYrich_N | InterPro:IPR003888 | InterPro:IPR003889 | PANTHER:PTHR14140 | PANTHER:PTHR14140:SF29 |
| PFscan:PS51542 | PFscan:PS51543 | SEG:seg | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrUn:-:306033276..306036809
Molecular Weight (calculated)
91356.1 Da
IEP (calculated)
6.664
GRAVY (calculated)
-0.438
Length
820 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAFSLPHCF IMRQQFPPVD QSFIADGNID QRSNHKRGRR RDFPQKSAFR KFSEKHKFGS SSTFTEPSFF TKAKTPSPAE ERNPPKPPKF LAENCNRQQH
101: HHSVGLPVQY QDFFITNLGD IDKHASYYNC HQIWPVGFTS YWHDRVTGSL FECEVCDGGS FAPLFKVRRL PCSVFPLPEA STILSQNGAR KAAETKESSS
201: FIGDTANDMD DDIYMMVDNP SETSQDFLSI FTSDTEDQRT SSCCNDVQSS NMMSQILPSY SENVPPGKEA NINDQIGEFT FEGTSPSSVW GMISFAMVEA
301: CEKMYKEHGH LVFSCTHSSE NHLLNKGRGC QNFNGPYAPL TRFCSSNGPS IPRVTEKKND VEPTYTLLKN WLCHDRIGLD LEFVQEIVES LPRSRSCINY
401: QFLCNRAEFR SSVTVASGLL LSVHKHGQSN VDTPYGRHGG VTGLHDPAQP SGSSIRKLPP GRPISHKLQP ESAADVFQIW EFLGRFAEII DLKEVPSYEQ
501: LEDELADPWP ICASEKETLS MGIQECRDYS SPMNSPANAS TSHSNSESGL SNNEEIVSVF IPVETSSMKE ARLDKLAAQT LGRCTGTILP GVHLALIKVL
601: FGEVLSKLNI DPKESKARHG RKKDTESLIP TKKFNFDMLT ANKLTWPELA RRYMLAISSI NGCMDVSDIS SRERVKLFRC LHGDGGILCG AVPGVAGMEK
701: DALLLLEAEN LICSSLSSEG NKVYMMDYKY SAEVPIADNR TLPDWAEALE PVRKLPTNVG TRIRNCVYQA LDRKPPEWAR KILEHSISKE VYKANASGRT
801: KVSNALAGCS HCIIAVPDCV
101: HHSVGLPVQY QDFFITNLGD IDKHASYYNC HQIWPVGFTS YWHDRVTGSL FECEVCDGGS FAPLFKVRRL PCSVFPLPEA STILSQNGAR KAAETKESSS
201: FIGDTANDMD DDIYMMVDNP SETSQDFLSI FTSDTEDQRT SSCCNDVQSS NMMSQILPSY SENVPPGKEA NINDQIGEFT FEGTSPSSVW GMISFAMVEA
301: CEKMYKEHGH LVFSCTHSSE NHLLNKGRGC QNFNGPYAPL TRFCSSNGPS IPRVTEKKND VEPTYTLLKN WLCHDRIGLD LEFVQEIVES LPRSRSCINY
401: QFLCNRAEFR SSVTVASGLL LSVHKHGQSN VDTPYGRHGG VTGLHDPAQP SGSSIRKLPP GRPISHKLQP ESAADVFQIW EFLGRFAEII DLKEVPSYEQ
501: LEDELADPWP ICASEKETLS MGIQECRDYS SPMNSPANAS TSHSNSESGL SNNEEIVSVF IPVETSSMKE ARLDKLAAQT LGRCTGTILP GVHLALIKVL
601: FGEVLSKLNI DPKESKARHG RKKDTESLIP TKKFNFDMLT ANKLTWPELA RRYMLAISSI NGCMDVSDIS SRERVKLFRC LHGDGGILCG AVPGVAGMEK
701: DALLLLEAEN LICSSLSSEG NKVYMMDYKY SAEVPIADNR TLPDWAEALE PVRKLPTNVG TRIRNCVYQA LDRKPPEWAR KILEHSISKE VYKANASGRT
801: KVSNALAGCS HCIIAVPDCV
0001: MEPTDSTNEQ LGDTKTAAVK EESRSFLGID LNEIPTGATL GGGCTAGQDD DGEYEPVEVV RSIHDNPDPA PGAPAEVPEP DRDASCGACG RPESIELVVV
0101: CDACERGFHM SCVNDGVEAA PSADWMCSDC RTGGERSKLW PLGVKSKLIL DMNASPPSDA EGYGAEETSD SRKHMLASSS CIGNSFDYAM MHSSFSSLGR
0201: GHASLEASGL MSRNTKMSMD ALGSHNLGFG FPLNLNNSSL PMRFPSLDPS ELFLQNLRHF ISERHGVLED GWRVEFRQPL NGYQLCAVYC APNGKTFSSI
0301: QEVACYLGLA INGNYSCMDA EIRNENSLLQ ERLHTPKRRK TSRWPNNGFP EQKGSSVSAQ LRRFPFNGQT MSPFAVKSGT HFQAGGSLSS GNNGCGCEEA
0401: KNGCPMQFED FFVLSLGRID IRQSYHNVNV IYPIGYKSCW HDKITGSLFT CEVSDGNSGP IFKVTRSPCS KSFIPAGSTV FSCPKIDEMV EQNSDKLSNR
0501: RDSTQERDDD ASVEILLSEH CPPLGDDILS CLREKSFSKT VNSLRSEVDS SRVDFDKNLS YDQDHGVEIG DIVVEEDSLS DAWKKVSQKL VDACSIVLKQ
0601: KGTLNFLCKH VDRETSEINW DTMNEKDNVI LSLSKFCCSL APCSVTCGEK DKSEFAAVVD ALSRWLDQNR FGLDADFVQE MIEHMPGAES CTNYRTLKSR
0701: SSSSVPITVA EGALVVKPKG GENVKDEVFG EISRKAKKPK LNGGHGVRNL HPPPGRPMCL RLPPGLVGDF LQVSEVFWRF HEILGFEEAF SPENLEQELI
0801: NPVFDGLFLD KPGKDDKRSE INFTDKDSTA TKLFSLFDES RQPFPAKNTS ASELKEKKAG DSSDFKISDS SRGSCVGALL TRAHISLLQV LICELQSKVA
0901: AFVDPNFDSG ESRSRRGRKK DDSTLSAKRN KLHMLPVNEF TWPELARRYI LSLLSMDGNL ESAEIAARES GKVFRCLQGD GGLLCGSLTG VAGMEADSML
1001: LAEAIKKISG SLTSENDVLS VEDDDSDGLD ATETNTCSGD IPEWAQVLEP VKKLPTNVGT RIRKCVYEAL ERNPPEWAKK ILEHSISKEI YKGNASGPTK
1101: KAVLSLLADI RGGDLVQRSI KGTKKRTYIS VSDVIMKKCR AVLRGVAAAD EDKVLCTLLG RKLLNSSDND DDGLLGSPAM VSRPLDFRTI DLRLAAGAYD
1201: GSTEAFLEDV LELWSSIRVM YADQPDCVDL VATLSEKFKS LYEAEVVPLV QKLKDYRKLE CLSAEMKKEI KDIVVSVNKL PKAPWDEGVC KVCGVDKDDD
1301: SVLLCDTCDA EYHTYCLNPP LIRIPDGNWY CPSCVIAKRM AQEALESYKL VRRRKGRKYQ GELTRASMEL TAHLADVMEE KDYWEFSAEE RILLLKLLCD
1401: ELLSSSLVHQ HLEQCAEAII EMQQKLRSLS SEWKNAKMRQ EFLTAKLAKV EPSILKEVGE PHNSSYFADQ MGCDPQPQEG VGDGVTRDDE TSSTAYLNKN
1501: QGKSPLETDT QPGESHVNFG ESKISSPETI SSPGRHELPI ADTSPLVTDN LPEKDTSETL LKSVGRNHET HSPNSNAVEL PTAHDASSQA SQELQACQQD
1601: LSATSNEIQN LQQSIRSIES QLLKQSIRRD FLGTDASGRL YWGCCFPDEN PRILVDGSIS LQKPVQADLI GSKVPSPFLH TVDHGRLRLS PWTYYETETE
1701: ISELVQWLHD DDLKERDLRE SILWWKRLRY GDVQKEKKQA QNLSAPVFAT GLETKAAMSM EKRYGPCIKL EMETLKKRGK KTKVAEREKL CRCECLESIL
1801: PSMIHCLICH KTFASDDEFE DHTESKCIPY SLATEEGKDI SDSSKAKESL KSDYLNVKSS AGKDVAEISN VSELDSGLIR YQEEESISPY HFEEICSKFV
1901: TKDCNRDLVK EIGLISSNGI PTFLPSSSTH LNDSVLISAK SNKPDGGDSG DQVIFAGPET NVEGLNSESN MSFDRSVTDS HGGPLDKPSG LGFGFSEQKN
2001: KKSSGSGLKS CCVVPQAALK RVTGKALPGF RFLKTNLLDM DVALPEEALR PSKSHPNRRR AWRVFVKSSQ SIYELVQATI VVEDMIKTEY LKNEWWYWSS
2101: LSAAAKISTL SALSVRIFSL DAAIIYDKPI TPSNPIDETK PIISLPDQKS QPVSDSQERS SRVRRSGKKR KEPEGS
0101: CDACERGFHM SCVNDGVEAA PSADWMCSDC RTGGERSKLW PLGVKSKLIL DMNASPPSDA EGYGAEETSD SRKHMLASSS CIGNSFDYAM MHSSFSSLGR
0201: GHASLEASGL MSRNTKMSMD ALGSHNLGFG FPLNLNNSSL PMRFPSLDPS ELFLQNLRHF ISERHGVLED GWRVEFRQPL NGYQLCAVYC APNGKTFSSI
0301: QEVACYLGLA INGNYSCMDA EIRNENSLLQ ERLHTPKRRK TSRWPNNGFP EQKGSSVSAQ LRRFPFNGQT MSPFAVKSGT HFQAGGSLSS GNNGCGCEEA
0401: KNGCPMQFED FFVLSLGRID IRQSYHNVNV IYPIGYKSCW HDKITGSLFT CEVSDGNSGP IFKVTRSPCS KSFIPAGSTV FSCPKIDEMV EQNSDKLSNR
0501: RDSTQERDDD ASVEILLSEH CPPLGDDILS CLREKSFSKT VNSLRSEVDS SRVDFDKNLS YDQDHGVEIG DIVVEEDSLS DAWKKVSQKL VDACSIVLKQ
0601: KGTLNFLCKH VDRETSEINW DTMNEKDNVI LSLSKFCCSL APCSVTCGEK DKSEFAAVVD ALSRWLDQNR FGLDADFVQE MIEHMPGAES CTNYRTLKSR
0701: SSSSVPITVA EGALVVKPKG GENVKDEVFG EISRKAKKPK LNGGHGVRNL HPPPGRPMCL RLPPGLVGDF LQVSEVFWRF HEILGFEEAF SPENLEQELI
0801: NPVFDGLFLD KPGKDDKRSE INFTDKDSTA TKLFSLFDES RQPFPAKNTS ASELKEKKAG DSSDFKISDS SRGSCVGALL TRAHISLLQV LICELQSKVA
0901: AFVDPNFDSG ESRSRRGRKK DDSTLSAKRN KLHMLPVNEF TWPELARRYI LSLLSMDGNL ESAEIAARES GKVFRCLQGD GGLLCGSLTG VAGMEADSML
1001: LAEAIKKISG SLTSENDVLS VEDDDSDGLD ATETNTCSGD IPEWAQVLEP VKKLPTNVGT RIRKCVYEAL ERNPPEWAKK ILEHSISKEI YKGNASGPTK
1101: KAVLSLLADI RGGDLVQRSI KGTKKRTYIS VSDVIMKKCR AVLRGVAAAD EDKVLCTLLG RKLLNSSDND DDGLLGSPAM VSRPLDFRTI DLRLAAGAYD
1201: GSTEAFLEDV LELWSSIRVM YADQPDCVDL VATLSEKFKS LYEAEVVPLV QKLKDYRKLE CLSAEMKKEI KDIVVSVNKL PKAPWDEGVC KVCGVDKDDD
1301: SVLLCDTCDA EYHTYCLNPP LIRIPDGNWY CPSCVIAKRM AQEALESYKL VRRRKGRKYQ GELTRASMEL TAHLADVMEE KDYWEFSAEE RILLLKLLCD
1401: ELLSSSLVHQ HLEQCAEAII EMQQKLRSLS SEWKNAKMRQ EFLTAKLAKV EPSILKEVGE PHNSSYFADQ MGCDPQPQEG VGDGVTRDDE TSSTAYLNKN
1501: QGKSPLETDT QPGESHVNFG ESKISSPETI SSPGRHELPI ADTSPLVTDN LPEKDTSETL LKSVGRNHET HSPNSNAVEL PTAHDASSQA SQELQACQQD
1601: LSATSNEIQN LQQSIRSIES QLLKQSIRRD FLGTDASGRL YWGCCFPDEN PRILVDGSIS LQKPVQADLI GSKVPSPFLH TVDHGRLRLS PWTYYETETE
1701: ISELVQWLHD DDLKERDLRE SILWWKRLRY GDVQKEKKQA QNLSAPVFAT GLETKAAMSM EKRYGPCIKL EMETLKKRGK KTKVAEREKL CRCECLESIL
1801: PSMIHCLICH KTFASDDEFE DHTESKCIPY SLATEEGKDI SDSSKAKESL KSDYLNVKSS AGKDVAEISN VSELDSGLIR YQEEESISPY HFEEICSKFV
1901: TKDCNRDLVK EIGLISSNGI PTFLPSSSTH LNDSVLISAK SNKPDGGDSG DQVIFAGPET NVEGLNSESN MSFDRSVTDS HGGPLDKPSG LGFGFSEQKN
2001: KKSSGSGLKS CCVVPQAALK RVTGKALPGF RFLKTNLLDM DVALPEEALR PSKSHPNRRR AWRVFVKSSQ SIYELVQATI VVEDMIKTEY LKNEWWYWSS
2101: LSAAAKISTL SALSVRIFSL DAAIIYDKPI TPSNPIDETK PIISLPDQKS QPVSDSQERS SRVRRSGKKR KEPEGS
Arabidopsis Description
MBD9MBD9 [Source:UniProtKB/TrEMBL;Acc:A0A178VJY9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.