Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG32724 | Sorghum | nucleus | 79.88 | 78.75 |
| Os01t0547200-01 | Rice | nucleus | 33.14 | 44.09 |
| TraesCS3B01G231800.2 | Wheat | nucleus | 35.93 | 39.28 |
| TraesCS3D01G202300.1 | Wheat | nucleus, plasma membrane | 35.93 | 39.21 |
| Zm00001d042613_P001 | Maize | cytosol | 5.83 | 37.91 |
| GSMUA_Achr5P01220_001 | Banana | nucleus | 14.29 | 30.95 |
| PGSC0003DMT400046398 | Potato | nucleus | 7.27 | 29.76 |
| GSMUA_Achr3P22100_001 | Banana | extracellular, vacuole | 9.81 | 29.59 |
| GSMUA_Achr11P... | Banana | nucleus | 14.45 | 28.98 |
| Bra019757.1-P | Field mustard | cytosol | 7.02 | 28.92 |
| CDX98073 | Canola | cytosol | 7.02 | 28.92 |
| Bra003689.1-P | Field mustard | nucleus | 10.14 | 25.97 |
| CDX68064 | Canola | nucleus | 10.14 | 25.97 |
| CDX88353 | Canola | nucleus | 10.06 | 24.69 |
| CDX79193 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 10.31 | 24.5 |
| CDX87531 | Canola | nucleus | 10.23 | 24.44 |
| Bra015682.1-P | Field mustard | nucleus | 10.23 | 24.44 |
| AT1G77250.1 | Thale cress | nucleus | 10.65 | 24.14 |
| Zm00001d049736_P001 | Maize | nucleus, plastid | 10.65 | 22.58 |
| Zm00001d035008_P001 | Maize | nucleus, plastid | 10.48 | 22.34 |
| VIT_18s0001g01580.t01 | Wine grape | nucleus | 11.67 | 22.04 |
| KRH53317 | Soybean | nucleus | 11.33 | 20.74 |
| Solyc04g058190.2.1 | Tomato | nucleus | 10.31 | 20.23 |
| KRH16456 | Soybean | nucleus | 12.34 | 18.18 |
| KRH18055 | Soybean | nucleus | 12.17 | 17.93 |
| TraesCSU01G205800.1 | Wheat | cytosol, nucleus, plastid | 4.48 | 6.46 |
| Zm00001d053697_P007 | Maize | nucleus | 10.06 | 5.54 |
Protein Annotations
| EntrezGene:103636005 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A1D6FXH3 | ProteinID:AQK96042.1 | ProteinID:AQK96043.1 |
| ProteinID:AQK96046.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR003656 | InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF02892 |
| PFscan:PS50016 | PFscan:PS50808 | PANTHER:PTHR10615 | PANTHER:PTHR10615:SF158 | SMART:SM00249 | SUPFAM:SSF57903 |
| UniParc:UPI0008451F1F | EnsemblPlantsGene:Zm00001d011158 | EnsemblPlants:Zm00001d011158_P001 | EnsemblPlants:Zm00001d011158_T001 | InterPro:Znf_BED | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
PHD-transcription factor 10RING/FYVE/PHD-type zinc finger family protein
Coordinates
chr8:+:141169109..141194760
Molecular Weight (calculated)
134091.0 Da
IEP (calculated)
6.812
GRAVY (calculated)
-0.723
Length
1183 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIDDEESQGI KKVHFRDSFS QHPIVTYKRR RQQKPQTQQQ LRQPPPSLQQ HPEPQLQVKL EPKTEDVPEQ QNNDTFWKSR DMGWKYGIMI DENRQHWKCM
0101: YCGLIRYGGG VSRLKRHLAG DLDVKMCPEV PADVVEEIRE HLRKKRERRR KRAAQNGGDN VKAKNPSGDA NVEKDLLPSN SVLPDGMDTN VLEEVTNQTG
0201: SVHHETTPRF PILRARDIGW EHAVDLDGNK RRWQCKFCSL CRSGGVTTLK AHLIDDSCPN VPKEISKKVS NFIEEKRATR LLLNNYVFNV DEDFNTILQE
0301: GTVEYVNEQQ PSRKATYVQT LSKCAINEIA AGSKQCGAEC SGQPVEHCDQ PEEQCTMDYG RMDRLTSNKN QILDKNTENS KNTKMLKPCR KSEFNTRKHI
0401: IIVDKIGRHW KCRYCGMDVY GKKFQLHYHL AGAFRQAKCP NVPREVFAKA RQHVLTKKML KKSKAEQQIP SSPHILAQSG EERQNNDPFC GNQSQLSINN
0501: EPREVHNYPA VLRDSAWEHS LIYEKENGHW KCKWCSIEGD HGLTRLMWHL VGWQNRPQCP NIPKDVAEKM KDQMMSKKEQ KARSGLFDGN GCCEVLCSSN
0601: SSQLDQNHLT ARIHDRCSSQ AFDHANSELK GCNMLSNTIL SQQSSNPQVH HEDPQVCHEQ ERKEVATSSE PGCEQGQRMQ WQSQNKPMME GPHDNGLCGD
0701: TNQLEEQKSG FGISDCWRYV LDGQMHLPDV QEGAGIGTCI RDALLYGCAE FGTVPDKMEM DCDKTVDANT AKCQNILKDV LRSENFALLC SVLCRTVHQD
0801: GERTRYFDFG VIDSRMKNGN YGPEPELFVH DLKLLWEDLK VAGQDIVHLA NNLSSLTEDS YEKLVGRERG SDDDELNEAV VARSEPKNLV QPNASVPLTS
0901: QGFNQLLDQP GPSDPSVVYK DSICNRCGKV AGAGSVLKCY RCMLPCHISC IEATGSPIST GRWCCKNCSA GTKEPVEGDM VLAHGNPNCL HESCVVCDRL
1001: AACRSPKCDN SRALVISSVD PEIDTCYSCK ICGGTEEDEK RFLICGNVLC RYMYYHIGCL KSMQISTSVE RGSPCWYCPS CLCRVCLCDK DDDLTILCDG
1101: CDEAYHIYCI TPRHTSIPKG QWYCSSCSVE RAEEGMRQYE RRTLKLHRKE DAGLQSWNFD GVDLLLSAAE QLRIDEQLET RTD
0101: YCGLIRYGGG VSRLKRHLAG DLDVKMCPEV PADVVEEIRE HLRKKRERRR KRAAQNGGDN VKAKNPSGDA NVEKDLLPSN SVLPDGMDTN VLEEVTNQTG
0201: SVHHETTPRF PILRARDIGW EHAVDLDGNK RRWQCKFCSL CRSGGVTTLK AHLIDDSCPN VPKEISKKVS NFIEEKRATR LLLNNYVFNV DEDFNTILQE
0301: GTVEYVNEQQ PSRKATYVQT LSKCAINEIA AGSKQCGAEC SGQPVEHCDQ PEEQCTMDYG RMDRLTSNKN QILDKNTENS KNTKMLKPCR KSEFNTRKHI
0401: IIVDKIGRHW KCRYCGMDVY GKKFQLHYHL AGAFRQAKCP NVPREVFAKA RQHVLTKKML KKSKAEQQIP SSPHILAQSG EERQNNDPFC GNQSQLSINN
0501: EPREVHNYPA VLRDSAWEHS LIYEKENGHW KCKWCSIEGD HGLTRLMWHL VGWQNRPQCP NIPKDVAEKM KDQMMSKKEQ KARSGLFDGN GCCEVLCSSN
0601: SSQLDQNHLT ARIHDRCSSQ AFDHANSELK GCNMLSNTIL SQQSSNPQVH HEDPQVCHEQ ERKEVATSSE PGCEQGQRMQ WQSQNKPMME GPHDNGLCGD
0701: TNQLEEQKSG FGISDCWRYV LDGQMHLPDV QEGAGIGTCI RDALLYGCAE FGTVPDKMEM DCDKTVDANT AKCQNILKDV LRSENFALLC SVLCRTVHQD
0801: GERTRYFDFG VIDSRMKNGN YGPEPELFVH DLKLLWEDLK VAGQDIVHLA NNLSSLTEDS YEKLVGRERG SDDDELNEAV VARSEPKNLV QPNASVPLTS
0901: QGFNQLLDQP GPSDPSVVYK DSICNRCGKV AGAGSVLKCY RCMLPCHISC IEATGSPIST GRWCCKNCSA GTKEPVEGDM VLAHGNPNCL HESCVVCDRL
1001: AACRSPKCDN SRALVISSVD PEIDTCYSCK ICGGTEEDEK RFLICGNVLC RYMYYHIGCL KSMQISTSVE RGSPCWYCPS CLCRVCLCDK DDDLTILCDG
1101: CDEAYHIYCI TPRHTSIPKG QWYCSSCSVE RAEEGMRQYE RRTLKLHRKE DAGLQSWNFD GVDLLLSAAE QLRIDEQLET RTD
001: MFMEEATSNG KGTEHNQPNG LVESEALNNW SAGCGAMANS ANASSRDSKK IQTYKRRKLG RSYSANKCSE NDRFSMEGVS HSESRESVSY ERFSIRTHLT
101: GELPKPPSPN KPSSESTNHE TVTAGCQHVL SHVLASKEFA SLNRLLSENL QGVKIDDFTS RTLIDTRMKE GVYEGSPLLF STDLQEVWQK MQDVGNDMAV
201: LANSLLELSR TSYKEQLKQF YTGESKPCPN AENIRNDSVS DICKLCGEKA EARDCLACDH CEDMYHVSCA QPGGKGMPTH SWYCLDCTSK GIGSPHENCV
301: VCEKMKTQGM MKTDNRSVDT STECKEDSNE SEENSSCNMN HEVHHVEMSR DSELCRTCGT KVDSGGKYIT CDHPFCPHKY YHIRCLTSRQ IKLHGVRWYC
401: SSCLCRNCLT DKDDDKIVLC DGCDDAYHIY CMRPPCESVP NGEWFCTACK AAILKVQKAR KAFEKKMETV QKQKGIKPKN LQGKPQSKDN GELDQSVGGM
501: DMLLNAADTL KDEEQMTFQS IK
101: GELPKPPSPN KPSSESTNHE TVTAGCQHVL SHVLASKEFA SLNRLLSENL QGVKIDDFTS RTLIDTRMKE GVYEGSPLLF STDLQEVWQK MQDVGNDMAV
201: LANSLLELSR TSYKEQLKQF YTGESKPCPN AENIRNDSVS DICKLCGEKA EARDCLACDH CEDMYHVSCA QPGGKGMPTH SWYCLDCTSK GIGSPHENCV
301: VCEKMKTQGM MKTDNRSVDT STECKEDSNE SEENSSCNMN HEVHHVEMSR DSELCRTCGT KVDSGGKYIT CDHPFCPHKY YHIRCLTSRQ IKLHGVRWYC
401: SSCLCRNCLT DKDDDKIVLC DGCDDAYHIY CMRPPCESVP NGEWFCTACK AAILKVQKAR KAFEKKMETV QKQKGIKPKN LQGKPQSKDN GELDQSVGGM
501: DMLLNAADTL KDEEQMTFQS IK
Arabidopsis Description
At1g77250 [Source:UniProtKB/TrEMBL;Acc:Q1JPM3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.