Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G202300.1 | Wheat | nucleus, plasma membrane | 92.98 | 92.8 |
| KXG32724 | Sorghum | nucleus | 40.57 | 36.58 |
| Zm00001d011158_P001 | Maize | nucleus | 39.28 | 35.93 |
| Os01t0547200-01 | Rice | nucleus | 27.54 | 33.52 |
| GSMUA_Achr5P01220_001 | Banana | nucleus | 16.54 | 32.78 |
| GSMUA_Achr3P22100_001 | Banana | extracellular, vacuole | 11.37 | 31.38 |
| GSMUA_Achr11P... | Banana | nucleus | 16.54 | 30.34 |
| Bra019757.1-P | Field mustard | cytosol | 7.86 | 29.62 |
| CDX98073 | Canola | cytosol | 7.86 | 29.62 |
| PGSC0003DMT400046398 | Potato | nucleus | 7.86 | 29.41 |
| TraesCS7B01G225200.1 | Wheat | nucleus, plastid | 13.68 | 26.38 |
| Bra003689.1-P | Field mustard | nucleus | 11.09 | 25.97 |
| CDX68064 | Canola | nucleus | 11.09 | 25.97 |
| CDX79193 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 11.46 | 24.9 |
| CDX88353 | Canola | nucleus | 10.72 | 24.07 |
| AT1G77250.1 | Thale cress | nucleus | 11.28 | 23.37 |
| CDX87531 | Canola | nucleus | 10.63 | 23.23 |
| Bra015682.1-P | Field mustard | nucleus | 10.63 | 23.23 |
| VIT_18s0001g01580.t01 | Wine grape | nucleus | 12.94 | 22.36 |
| KRH53317 | Soybean | nucleus | 12.38 | 20.74 |
| Solyc04g058190.2.1 | Tomato | nucleus | 11.37 | 20.4 |
| KRH18055 | Soybean | nucleus | 13.96 | 18.8 |
| KRH16456 | Soybean | nucleus | 13.49 | 18.18 |
| TraesCS5B01G570700.1 | Wheat | mitochondrion | 1.94 | 7.0 |
| TraesCS5B01G537600.1 | Wheat | mitochondrion, plastid | 1.76 | 6.38 |
| TraesCS5B01G538100.1 | Wheat | nucleus | 4.62 | 5.64 |
| TraesCS6B01G197500.1 | Wheat | nucleus | 10.81 | 5.6 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G231800.2 | EnsemblPlantsGene:TraesCS3B01G231800 | Gene3D:3.30.40.10 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR10615 | PANTHER:PTHR10615:SF158 | PFAM:PF00628 |
| PFscan:PS50016 | SMART:SM00249 | SUPFAM:SSF57903 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3B:-:351987451..352001814
Molecular Weight (calculated)
122106.0 Da
IEP (calculated)
7.379
GRAVY (calculated)
-0.715
Length
1082 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFYIVLQPPL LLRGVRDIGW EHAVDLDGNK KRWQCKWCDL CRSGGVTTLK AHLTDSSCPK IPMEMSKQVL HFVEEKRAAR QLFNRDPWPP YKKIDGVSLF
0101: CSEVKEEGTV SYKNGQQPSN NGMHMQTSGN CTIDELAARS NQCGTEHSGQ PVEDYEQSKK GSDWAEEQLP IENGKHHVLN NEHHIVDKNN GNPQNREKLN
0201: LECDNSIQGA VTTLKAHLTG SEEEGTVPCK NDQQPSNNDM HMQTSEKCAI DEKLAARSNQ CGKHHCGQPV ENYEQSKICS DWPEEQLPME HEKHHVLNNE
0301: HQIVDKTTEN SQNKQILKHP RKTRFNLRKH IVIIDEIARH WRCRYCGMDG HGKTSRLHYH LAGVFRHPKC TSVPKEVFAK AKHHILIKRR PGMKKTGQQA
0401: PPEPQILVQS SVILENNDPA FSNLPQLPIN GLSSEARSSY PTRLRDNAWE HSLVYDREKG HWKCKWCSLE GYHGVTRLKW HLVGWQNHPR CCKIPEDAAK
0501: RVRDQMISRE KKKVRTSGPH AGIDSGDILC SSMSSQFDEE HFTIAVQNSS SSQAFDEANR TSNTCNTLSN TISGSQPLME GPHGILYSNT NKSEMLSRRS
0601: DCWSHWRYVL NGLMHLHGVQ EGAGIQSCIR DVLHSCSKFE SLRDKVEMDS DRTVSRNTGI AECKNVLVDI LRSEDFALLC NVLRKTVHQD GERTKYFDFG
0701: VIDSRMKNGE YGCAPEIFKD DLKLLWENLK MAGQDIIDLA NNLSSLTEAS YTNEVGRQRG SCDCEEELKG AVLGSSEPKK LVESAPSVPS TSQGCQPLDY
0801: PERTDVSDVQ KGSACDQCGK ETRGVSTVIC NVCKLVCHMS CIDPPIPSTS TGSWYCKGCS STTCNESAQG GYEPNSLHGN CVLCKRLEVC MPPECKEQTP
0901: VGKSRATVLS STEGRELSNI DPGGSCKICG TPEEDAKRFL VCGHSHCPYK YYHICCLKSK QIASDMQRDK PCWYCPSCLC RVCLSDRDDD LTILCDGCDE
1001: AYHLYCITPR RTWIPKGKWY CSRCSVERAK AGMRRYEKKM LKQHRKDDDA RLESRNFAAV DLLLSAAEKL REDEQLVACA DY
0101: CSEVKEEGTV SYKNGQQPSN NGMHMQTSGN CTIDELAARS NQCGTEHSGQ PVEDYEQSKK GSDWAEEQLP IENGKHHVLN NEHHIVDKNN GNPQNREKLN
0201: LECDNSIQGA VTTLKAHLTG SEEEGTVPCK NDQQPSNNDM HMQTSEKCAI DEKLAARSNQ CGKHHCGQPV ENYEQSKICS DWPEEQLPME HEKHHVLNNE
0301: HQIVDKTTEN SQNKQILKHP RKTRFNLRKH IVIIDEIARH WRCRYCGMDG HGKTSRLHYH LAGVFRHPKC TSVPKEVFAK AKHHILIKRR PGMKKTGQQA
0401: PPEPQILVQS SVILENNDPA FSNLPQLPIN GLSSEARSSY PTRLRDNAWE HSLVYDREKG HWKCKWCSLE GYHGVTRLKW HLVGWQNHPR CCKIPEDAAK
0501: RVRDQMISRE KKKVRTSGPH AGIDSGDILC SSMSSQFDEE HFTIAVQNSS SSQAFDEANR TSNTCNTLSN TISGSQPLME GPHGILYSNT NKSEMLSRRS
0601: DCWSHWRYVL NGLMHLHGVQ EGAGIQSCIR DVLHSCSKFE SLRDKVEMDS DRTVSRNTGI AECKNVLVDI LRSEDFALLC NVLRKTVHQD GERTKYFDFG
0701: VIDSRMKNGE YGCAPEIFKD DLKLLWENLK MAGQDIIDLA NNLSSLTEAS YTNEVGRQRG SCDCEEELKG AVLGSSEPKK LVESAPSVPS TSQGCQPLDY
0801: PERTDVSDVQ KGSACDQCGK ETRGVSTVIC NVCKLVCHMS CIDPPIPSTS TGSWYCKGCS STTCNESAQG GYEPNSLHGN CVLCKRLEVC MPPECKEQTP
0901: VGKSRATVLS STEGRELSNI DPGGSCKICG TPEEDAKRFL VCGHSHCPYK YYHICCLKSK QIASDMQRDK PCWYCPSCLC RVCLSDRDDD LTILCDGCDE
1001: AYHLYCITPR RTWIPKGKWY CSRCSVERAK AGMRRYEKKM LKQHRKDDDA RLESRNFAAV DLLLSAAEKL REDEQLVACA DY
001: MFMEEATSNG KGTEHNQPNG LVESEALNNW SAGCGAMANS ANASSRDSKK IQTYKRRKLG RSYSANKCSE NDRFSMEGVS HSESRESVSY ERFSIRTHLT
101: GELPKPPSPN KPSSESTNHE TVTAGCQHVL SHVLASKEFA SLNRLLSENL QGVKIDDFTS RTLIDTRMKE GVYEGSPLLF STDLQEVWQK MQDVGNDMAV
201: LANSLLELSR TSYKEQLKQF YTGESKPCPN AENIRNDSVS DICKLCGEKA EARDCLACDH CEDMYHVSCA QPGGKGMPTH SWYCLDCTSK GIGSPHENCV
301: VCEKMKTQGM MKTDNRSVDT STECKEDSNE SEENSSCNMN HEVHHVEMSR DSELCRTCGT KVDSGGKYIT CDHPFCPHKY YHIRCLTSRQ IKLHGVRWYC
401: SSCLCRNCLT DKDDDKIVLC DGCDDAYHIY CMRPPCESVP NGEWFCTACK AAILKVQKAR KAFEKKMETV QKQKGIKPKN LQGKPQSKDN GELDQSVGGM
501: DMLLNAADTL KDEEQMTFQS IK
101: GELPKPPSPN KPSSESTNHE TVTAGCQHVL SHVLASKEFA SLNRLLSENL QGVKIDDFTS RTLIDTRMKE GVYEGSPLLF STDLQEVWQK MQDVGNDMAV
201: LANSLLELSR TSYKEQLKQF YTGESKPCPN AENIRNDSVS DICKLCGEKA EARDCLACDH CEDMYHVSCA QPGGKGMPTH SWYCLDCTSK GIGSPHENCV
301: VCEKMKTQGM MKTDNRSVDT STECKEDSNE SEENSSCNMN HEVHHVEMSR DSELCRTCGT KVDSGGKYIT CDHPFCPHKY YHIRCLTSRQ IKLHGVRWYC
401: SSCLCRNCLT DKDDDKIVLC DGCDDAYHIY CMRPPCESVP NGEWFCTACK AAILKVQKAR KAFEKKMETV QKQKGIKPKN LQGKPQSKDN GELDQSVGGM
501: DMLLNAADTL KDEEQMTFQS IK
Arabidopsis Description
At1g77250 [Source:UniProtKB/TrEMBL;Acc:Q1JPM3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.