Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015682.1-P | Field mustard | nucleus | 99.19 | 99.19 |
| CDX88353 | Canola | nucleus | 80.2 | 82.37 |
| CDX98073 | Canola | cytosol | 35.96 | 62.02 |
| CDX79193 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 56.77 | 56.43 |
| CDX68064 | Canola | nucleus | 51.92 | 55.63 |
| AT1G77250.1 | Thale cress | nucleus | 55.56 | 52.68 |
| PGSC0003DMT400046398 | Potato | nucleus | 24.24 | 41.52 |
| EES01867 | Sorghum | nucleus | 12.53 | 35.63 |
| Zm00001d042613_P001 | Maize | cytosol | 12.53 | 34.07 |
| Os01t0883400-00 | Rice | extracellular | 12.32 | 27.6 |
| KRH53317 | Soybean | nucleus | 35.96 | 27.55 |
| Solyc04g058190.2.1 | Tomato | nucleus | 33.33 | 27.36 |
| VIT_18s0001g01580.t01 | Wine grape | nucleus | 34.14 | 27.0 |
| GSMUA_Achr5P01220_001 | Banana | nucleus | 29.7 | 26.92 |
| GSMUA_Achr3P22100_001 | Banana | extracellular, vacuole | 20.81 | 26.28 |
| GSMUA_Achr11P... | Banana | nucleus | 30.1 | 25.25 |
| Zm00001d049736_P001 | Maize | nucleus, plastid | 27.27 | 24.19 |
| Zm00001d035008_P001 | Maize | nucleus, plastid | 26.87 | 23.96 |
| Os08t0105000-01 | Rice | nucleus | 26.06 | 22.91 |
| KXG24174 | Sorghum | nucleus | 25.45 | 22.87 |
| HORVU7Hr1G077650.5 | Barley | nucleus, plastid | 25.66 | 22.6 |
| TraesCS7B01G225200.1 | Wheat | nucleus, plastid | 25.45 | 22.46 |
| TraesCS7D01G321100.1 | Wheat | nucleus, plastid | 25.45 | 22.38 |
| TraesCS7A01G324700.2 | Wheat | nucleus, plastid | 25.45 | 22.3 |
| KRH18055 | Soybean | nucleus | 36.16 | 22.29 |
| KRH16456 | Soybean | nucleus | 34.75 | 21.42 |
| TraesCS3D01G202300.1 | Wheat | nucleus, plasma membrane | 23.64 | 10.79 |
| TraesCS3B01G231800.2 | Wheat | nucleus | 23.23 | 10.63 |
| KXG32724 | Sorghum | nucleus | 25.05 | 10.33 |
| Zm00001d011158_P001 | Maize | nucleus | 24.44 | 10.23 |
| TraesCSU01G205800.1 | Wheat | cytosol, nucleus, plastid | 5.45 | 3.29 |
| CDY49055 | Canola | nucleus | 14.14 | 3.28 |
| CDY37520 | Canola | nucleus | 14.14 | 3.27 |
| CDY28674 | Canola | nucleus | 13.74 | 3.11 |
| Os01t0547200-01 | Rice | nucleus | 5.05 | 2.81 |
Protein Annotations
| EnsemblPlants:CDX87531 | EnsemblPlantsGene:GSBRNA2T00146523001 | Gene3D:3.30.40.10 | GO:A0A078DE75 | InterPro:IPR013083 | InterPro:IPR019787 |
| InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR10615 |
| PANTHER:PTHR10615:SF158 | PFAM:PF00628 | PFscan:PS50016 | ProteinID:CDX87531 | ProteinID:CDX87531.1 | ScanProsite:PS01359 |
| SEG:seg | SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI0004EEA18A | MapMan:35.1 | : |
Description
BnaA07g33420D
Coordinates
chrLK031850:+:1074301..1076993
Molecular Weight (calculated)
54281.9 Da
IEP (calculated)
5.651
GRAVY (calculated)
-0.643
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MIVDEVISNG DGRESSQPNG TLNMANASSG DDKNSRICKR RKLESSVSTV GLSGSRESVA CEMNDQRCSG GTHLTGGLPQ LSNPDEPTTE PHKYETVTAG
101: CQNVLSQVLA SKEFASLSKL LSENLQGVKI EDLPCRNLID TRMQEGAYEG SPVLFSTDLQ EVWKKLQDVG NGMAALAGSL LELSKTSCTE QLKQFNTVEP
201: KPHSNVETTR NDSGNDVCKL CGEKAAVKDF LACDHCDDMY HVSCAHPGEK EMSSDTWYCL NCTDNGFGSP HENCVVCEKK KTEKLLVKTD NNGCVDDSSA
301: ERKEDSNGSE ENSTSNMMNH GDEAMETKID SELCRTCGTK VEKGDGNRFI TCDHPFCPHK YYHIRCLTSK QIKLHNVSWY CSSCLCRNCL TDKDDDKIVL
401: CDGCDDAYHI YCMKPPCASV PDGEWFCRTC KVAIQKVRKI RNVVEKKKVG AVQKLKGKMN ESKPGSKGKG GLDSGVGGMD MLLNAADTLK DQEQM
101: CQNVLSQVLA SKEFASLSKL LSENLQGVKI EDLPCRNLID TRMQEGAYEG SPVLFSTDLQ EVWKKLQDVG NGMAALAGSL LELSKTSCTE QLKQFNTVEP
201: KPHSNVETTR NDSGNDVCKL CGEKAAVKDF LACDHCDDMY HVSCAHPGEK EMSSDTWYCL NCTDNGFGSP HENCVVCEKK KTEKLLVKTD NNGCVDDSSA
301: ERKEDSNGSE ENSTSNMMNH GDEAMETKID SELCRTCGTK VEKGDGNRFI TCDHPFCPHK YYHIRCLTSK QIKLHNVSWY CSSCLCRNCL TDKDDDKIVL
401: CDGCDDAYHI YCMKPPCASV PDGEWFCRTC KVAIQKVRKI RNVVEKKKVG AVQKLKGKMN ESKPGSKGKG GLDSGVGGMD MLLNAADTLK DQEQM
001: MFMEEATSNG KGTEHNQPNG LVESEALNNW SAGCGAMANS ANASSRDSKK IQTYKRRKLG RSYSANKCSE NDRFSMEGVS HSESRESVSY ERFSIRTHLT
101: GELPKPPSPN KPSSESTNHE TVTAGCQHVL SHVLASKEFA SLNRLLSENL QGVKIDDFTS RTLIDTRMKE GVYEGSPLLF STDLQEVWQK MQDVGNDMAV
201: LANSLLELSR TSYKEQLKQF YTGESKPCPN AENIRNDSVS DICKLCGEKA EARDCLACDH CEDMYHVSCA QPGGKGMPTH SWYCLDCTSK GIGSPHENCV
301: VCEKMKTQGM MKTDNRSVDT STECKEDSNE SEENSSCNMN HEVHHVEMSR DSELCRTCGT KVDSGGKYIT CDHPFCPHKY YHIRCLTSRQ IKLHGVRWYC
401: SSCLCRNCLT DKDDDKIVLC DGCDDAYHIY CMRPPCESVP NGEWFCTACK AAILKVQKAR KAFEKKMETV QKQKGIKPKN LQGKPQSKDN GELDQSVGGM
501: DMLLNAADTL KDEEQMTFQS IK
101: GELPKPPSPN KPSSESTNHE TVTAGCQHVL SHVLASKEFA SLNRLLSENL QGVKIDDFTS RTLIDTRMKE GVYEGSPLLF STDLQEVWQK MQDVGNDMAV
201: LANSLLELSR TSYKEQLKQF YTGESKPCPN AENIRNDSVS DICKLCGEKA EARDCLACDH CEDMYHVSCA QPGGKGMPTH SWYCLDCTSK GIGSPHENCV
301: VCEKMKTQGM MKTDNRSVDT STECKEDSNE SEENSSCNMN HEVHHVEMSR DSELCRTCGT KVDSGGKYIT CDHPFCPHKY YHIRCLTSRQ IKLHGVRWYC
401: SSCLCRNCLT DKDDDKIVLC DGCDDAYHIY CMRPPCESVP NGEWFCTACK AAILKVQKAR KAFEKKMETV QKQKGIKPKN LQGKPQSKDN GELDQSVGGM
501: DMLLNAADTL KDEEQMTFQS IK
Arabidopsis Description
At1g77250 [Source:UniProtKB/TrEMBL;Acc:Q1JPM3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.