Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 3
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G455600.1 | Wheat | endoplasmic reticulum | 97.22 | 97.22 |
| TraesCS5B01G463200.1 | Wheat | golgi | 96.67 | 96.67 |
| TraesCS1D01G238300.1 | Wheat | endoplasmic reticulum | 92.78 | 92.78 |
| Zm00001d037926_P001 | Maize | endoplasmic reticulum | 91.67 | 91.67 |
| EES19438 | Sorghum | endoplasmic reticulum | 91.67 | 91.67 |
| Os05t0297900-01 | Rice | plasma membrane | 91.11 | 91.11 |
| Zm00001d009866_P004 | Maize | endoplasmic reticulum | 90.0 | 90.0 |
| EES16720 | Sorghum | plasma membrane | 88.89 | 88.89 |
| GSMUA_Achr2P06860_001 | Banana | endoplasmic reticulum | 83.89 | 83.89 |
| GSMUA_Achr8P30160_001 | Banana | plasma membrane | 78.89 | 78.89 |
| HORVU5Hr1G109380.2 | Barley | cytosol, golgi, plasma membrane, plastid | 96.11 | 70.61 |
| TraesCS6D01G314000.1 | Wheat | cytosol | 37.78 | 48.23 |
| TraesCS6D01G312400.1 | Wheat | endoplasmic reticulum, golgi | 40.0 | 47.37 |
| TraesCS6D01G311800.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 44.44 | 47.34 |
| TraesCS6D01G312200.1 | Wheat | golgi | 42.22 | 44.97 |
| TraesCS6D01G313700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 42.22 | 44.97 |
| TraesCS3D01G089300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 39.44 | 42.01 |
Protein Annotations
| MapMan:18.10.1.1.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006465 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:LexA/Signal_pep-like_sf | PFAM:PF00717 | PRINTS:PR00728 | PANTHER:PTHR10806 | PANTHER:PTHR10806:SF16 | InterPro:Peptidase_S24_S26A/B/C |
| InterPro:Peptidase_S26B | SUPFAM:SSF51306 | TIGRFAMs:TIGR02228 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5D01G466200 | EnsemblPlants:TraesCS5D01G466200.1 |
| TIGR:cd06530 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:508620173..508622491
Molecular Weight (calculated)
20108.0 Da
IEP (calculated)
6.687
GRAVY (calculated)
0.324
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFIGDQVES IRSMQVRQVL AQIISLGMIV TSALIIWKGL IVATGSESPV VVVLSGSMEP GFKRGDILFL RMSKEPIRTG EIVVFNVDGR EIPIVHRVIK
101: VHERQESAEV DILTKGDNNF EDDRLLYAHG ELWLQQHHIM GRAVGYLPYV GWVTIVMTEK PIIKYLLIGA LGLLVIMSKD
101: VHERQESAEV DILTKGDNNF EDDRLLYAHG ELWLQQHHIM GRAVGYLPYV GWVTIVMTEK PIIKYLLIGA LGLLVIMSKD
001: MGFIGETVDS IKSIKIRQVL TQAITLGMIV TSALIIWKAL ICVTGSESPV VVVLSESMEP GFQRGDILFL RMTDEPIRAG EIVVFSVDGR EIPIVHRAIK
101: VHERGDTKAV DVLTKGDNND IDDIGLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
101: VHERGDTKAV DVLTKGDNND IDDIGLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
Arabidopsis Description
Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:A0A178VNL0]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.