Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0273800-02 | Rice | endoplasmic reticulum, golgi, plasma membrane | 95.0 | 95.0 |
| EES16720 | Sorghum | plasma membrane | 93.33 | 93.33 |
| Zm00001d037926_P001 | Maize | endoplasmic reticulum | 92.78 | 92.78 |
| TraesCS5A01G455600.1 | Wheat | endoplasmic reticulum | 92.78 | 92.78 |
| EES19438 | Sorghum | endoplasmic reticulum | 92.78 | 92.78 |
| Zm00001d009866_P004 | Maize | endoplasmic reticulum | 92.22 | 92.22 |
| TraesCS5B01G463200.1 | Wheat | golgi | 92.22 | 92.22 |
| TraesCS1B01G249800.1 | Wheat | endoplasmic reticulum | 92.22 | 92.22 |
| TraesCS1A01G233200.1 | Wheat | golgi | 92.22 | 92.22 |
| TraesCS1D01G238300.1 | Wheat | endoplasmic reticulum | 91.67 | 91.67 |
| TraesCS5D01G466200.1 | Wheat | endoplasmic reticulum | 91.11 | 91.11 |
| GSMUA_Achr2P06860_001 | Banana | endoplasmic reticulum | 87.78 | 87.78 |
| VIT_09s0002g06550.t01 | Wine grape | endoplasmic reticulum | 87.22 | 87.22 |
| KRH56207 | Soybean | endoplasmic reticulum | 87.22 | 87.22 |
| AT1G52600.1 | Thale cress | endoplasmic reticulum | 86.67 | 86.67 |
| CDY40147 | Canola | cytosol, endoplasmic reticulum, golgi | 86.11 | 86.11 |
| CDY65907 | Canola | cytosol, endoplasmic reticulum, golgi | 86.11 | 86.11 |
| Bra018976.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 86.11 | 86.11 |
| CDY70157 | Canola | endoplasmic reticulum, golgi, vacuole | 72.78 | 85.62 |
| Bra030372.1-P | Field mustard | endoplasmic reticulum | 85.56 | 85.56 |
| CDX87924 | Canola | endoplasmic reticulum | 85.56 | 85.56 |
| CDY60554 | Canola | endoplasmic reticulum | 85.56 | 85.56 |
| Solyc12g006540.1.1 | Tomato | nucleus | 84.44 | 84.44 |
| Bra040958.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 71.67 | 84.31 |
| KRH09745 | Soybean | extracellular, golgi, vacuole | 70.56 | 83.01 |
| KRH02723 | Soybean | endoplasmic reticulum | 86.67 | 81.68 |
| CDY47542 | Canola | endoplasmic reticulum | 81.67 | 81.67 |
| GSMUA_Achr8P30160_001 | Banana | plasma membrane | 81.11 | 81.11 |
| CDY20147 | Canola | endoplasmic reticulum | 80.56 | 80.56 |
| CDY21864 | Canola | endoplasmic reticulum | 80.56 | 80.56 |
| Bra021131.1-P | Field mustard | endoplasmic reticulum | 80.56 | 80.56 |
| AT3G15710.1 | Thale cress | endoplasmic reticulum | 80.0 | 80.0 |
| CDX97698 | Canola | cytosol, endoplasmic reticulum, golgi | 78.89 | 78.89 |
| CDY30100 | Canola | cytosol, endoplasmic reticulum, golgi | 78.89 | 78.89 |
| Bra027214.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 78.33 | 78.33 |
| HORVU1Hr1G057530.2 | Barley | endoplasmic reticulum, plasma membrane, plastid | 92.78 | 78.04 |
| VIT_11s0016g05130.t01 | Wine grape | cytosol, golgi, plasma membrane | 73.89 | 73.89 |
| CDY47544 | Canola | extracellular | 46.67 | 68.29 |
| PGSC0003DMT400048805 | Potato | plastid | 77.22 | 68.14 |
| HORVU5Hr1G109380.2 | Barley | cytosol, golgi, plasma membrane, plastid | 92.22 | 67.76 |
| KRH54892 | Soybean | cytosol, extracellular, plasma membrane | 32.22 | 58.59 |
| CDX98638 | Canola | extracellular | 18.89 | 55.74 |
| CDY37720 | Canola | extracellular | 18.89 | 55.74 |
| CDX87773 | Canola | golgi | 20.0 | 53.73 |
| CDY30660 | Canola | plasma membrane | 34.44 | 24.6 |
| CDX87925 | Canola | cytosol | 5.0 | 5.36 |
Protein Annotations
| MapMan:18.10.1.1.1 | EntrezGene:4338334 | EntrezGene:4340738 | EMBL:AK058911 | EMBL:AK071238 | EMBL:AK102635 |
| EMBL:AK106215 | EMBL:AK111407 | ProteinID:BAD69161.1 | ProteinID:BAF17035.1 | ProteinID:BAF19285.1 | ProteinID:BAS93206.1 |
| ProteinID:BAS97212.1 | ProteinID:EEE63134.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005787 | GO:GO:0005975 | GO:GO:0006464 |
| GO:GO:0006465 | GO:GO:0006486 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:LexA/Signal_pep-like_sf | EnsemblPlantsGene:Os05g0297900 | EnsemblPlants:Os05t0297900-01 | PFAM:PF00717 |
| PRINTS:PR00728 | PANTHER:PTHR10806 | PANTHER:PTHR10806:SF16 | InterPro:Peptidase_S24_S26A/B/C | InterPro:Peptidase_S26B | UniProt:Q0DJD8 |
| MEROPS:S26.010 | SUPFAM:SSF51306 | TIGRFAMs:TIGR02228 | TMHMM:TMhelix | UniParc:UPI0000E1240C | RefSeq:XP_015637864.1 |
| RefSeq:XP_015644494.1 | RefSeq:XP_015644495.1 | : | : | : | : |
Description
Type I Signal Peptidase 4, TYPE I SIGNAL PEPTIDASE 4Similar to Signal peptidase 18 subunit (Fragment). (Os05t0297900-01)
Coordinates
chr5:+:13282401..13286141
Molecular Weight (calculated)
20028.9 Da
IEP (calculated)
6.899
GRAVY (calculated)
0.370
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFIGDTVES IRSIQIRQVL AQIISLGMIV TSALIIWKGL MVATGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRTG EIVVFNIDGR EIPIVHRVIK
101: VHEREESAEV DILTKGDNNF GDDRLLYAHG QLWLHQHHIM GRAVGFLPYV GWVTIIMTEK PFIKYLLIGA LGLLVITSKE
101: VHEREESAEV DILTKGDNNF GDDRLLYAHG QLWLHQHHIM GRAVGFLPYV GWVTIIMTEK PFIKYLLIGA LGLLVITSKE
001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
Arabidopsis Description
Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.