CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
mitochondrion 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0273800-02	Rice	endoplasmic reticulum, golgi, plasma membrane	93.89	93.89
EES19438	Sorghum	endoplasmic reticulum	93.33	93.33
Os05t0297900-01	Rice	plasma membrane	93.33	93.33
TraesCS5A01G455600.1	Wheat	endoplasmic reticulum	89.44	89.44
TraesCS1B01G249800.1	Wheat	endoplasmic reticulum	89.44	89.44
TraesCS1A01G233200.1	Wheat	golgi	89.44	89.44
TraesCS5D01G466200.1	Wheat	endoplasmic reticulum	88.89	88.89
TraesCS5B01G463200.1	Wheat	golgi	88.89	88.89
TraesCS1D01G238300.1	Wheat	endoplasmic reticulum	88.89	88.89
GSMUA_Achr2P06860_001	Banana	endoplasmic reticulum	87.78	87.78
VIT_09s0002g06550.t01	Wine grape	endoplasmic reticulum	86.11	86.11
CDY70157	Canola	endoplasmic reticulum, golgi, vacuole	72.78	85.62
KRH56207	Soybean	endoplasmic reticulum	85.0	85.0
Solyc12g006540.1.1	Tomato	nucleus	84.44	84.44
Bra040958.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	71.67	84.31
AT1G52600.1	Thale cress	endoplasmic reticulum	83.33	83.33
CDX87924	Canola	endoplasmic reticulum	82.78	82.78
CDY40147	Canola	cytosol, endoplasmic reticulum, golgi	82.78	82.78
CDY65907	Canola	cytosol, endoplasmic reticulum, golgi	82.78	82.78
Bra018976.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	82.78	82.78
KRH09745	Soybean	extracellular, golgi, vacuole	70.0	82.35
CDY60554	Canola	endoplasmic reticulum	82.22	82.22
Bra030372.1-P	Field mustard	endoplasmic reticulum	82.22	82.22
GSMUA_Achr8P30160_001	Banana	plasma membrane	82.22	82.22
CDY47542	Canola	endoplasmic reticulum	81.11	81.11
KRH02723	Soybean	endoplasmic reticulum	83.89	79.06
AT3G15710.1	Thale cress	endoplasmic reticulum	78.33	78.33
Bra021131.1-P	Field mustard	endoplasmic reticulum	77.22	77.22
CDY20147	Canola	endoplasmic reticulum	77.22	77.22
CDY21864	Canola	endoplasmic reticulum	77.22	77.22
CDX97698	Canola	cytosol, endoplasmic reticulum, golgi	76.11	76.11
CDY30100	Canola	cytosol, endoplasmic reticulum, golgi	76.11	76.11
HORVU1Hr1G057530.2	Barley	endoplasmic reticulum, plasma membrane, plastid	90.0	75.7
Bra027214.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	75.56	75.56
VIT_11s0016g05130.t01	Wine grape	cytosol, golgi, plasma membrane	73.89	73.89
EES07797	Sorghum	endoplasmic reticulum	72.22	71.43
PGSC0003DMT400048805	Potato	plastid	78.33	69.12
HORVU5Hr1G109380.2	Barley	cytosol, golgi, plasma membrane, plastid	89.44	65.71
CDY47544	Canola	extracellular	44.44	65.04
CDX98638	Canola	extracellular	20.0	59.02
KRH54892	Soybean	cytosol, extracellular, plasma membrane	32.22	58.59
CDY37720	Canola	extracellular	18.89	55.74
CDX87773	Canola	golgi	19.44	52.24
CDY30660	Canola	plasma membrane	33.33	23.81
CDX87925	Canola	cytosol	5.56	5.95

Protein Annotations

MapMan:18.10.1.1.1	EntrezGene:8073502	UniProt:C5YSM3	EnsemblPlants:EES16720	ProteinID:EES16720	ProteinID:EES16720.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005787	GO:GO:0006465	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538
InterPro:LexA/Signal_pep-like_sf	ProteinID:OQU78804.1	ProteinID:OQU78805.1	PFAM:PF00717	PRINTS:PR00728	PANTHER:PTHR10806
PANTHER:PTHR10806:SF16	InterPro:Peptidase_S24_S26A/B/C	InterPro:Peptidase_S26B	EnsemblPlantsGene:SORBI_3008G050700	SUPFAM:SSF51306	TIGRFAMs:TIGR02228
UniParc:UPI0001A88694	RefSeq:XP_002442882.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:5016553..5020224

Molecular Weight (calculated)

19980.9 Da

IEP (calculated)

8.967

GRAVY (calculated)

0.398

Length

180 amino acids

Sequence
(BLAST)

001: MGFVGDTVES IRSIQVRHVL SQIISLGMIV TSALIIWKGL IVVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRTG EIVVFNIDGR EIPIVHRVIK
101: VHERQGTAEV NILTKGDNNF GDDRLLYAHG QLWLQQHHIM GRAVGFLPYV GWVTIIMTEK PFIKYLLIGA LGLLVITTKE

Best Arabidopsis Sequence Match ( AT1G52600.1 )
(BLAST)

001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD

Arabidopsis Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.