Factsheet for HORVU5Hr1G109380.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
golgi 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G455600.1	Wheat	endoplasmic reticulum	71.84	97.78
TraesCS5B01G463200.1	Wheat	golgi	71.43	97.22
TraesCS5D01G466200.1	Wheat	endoplasmic reticulum	70.61	96.11
Zm00001d037926_P001	Maize	endoplasmic reticulum	67.76	92.22
EES19438	Sorghum	endoplasmic reticulum	67.76	92.22
Os05t0297900-01	Rice	plasma membrane	67.76	92.22
Zm00001d009866_P004	Maize	endoplasmic reticulum	66.53	90.56
EES16720	Sorghum	plasma membrane	65.71	89.44
VIT_09s0002g06550.t01	Wine grape	endoplasmic reticulum	62.86	85.56
GSMUA_Achr2P06860_001	Banana	endoplasmic reticulum	62.86	85.56
KRH56207	Soybean	endoplasmic reticulum	62.45	85.0
Solyc12g006540.1.1	Tomato	nucleus	61.63	83.89
AT1G52600.1	Thale cress	endoplasmic reticulum	60.82	82.78
KRH09745	Soybean	extracellular, golgi, vacuole	51.43	82.35
CDY70157	Canola	endoplasmic reticulum, golgi, vacuole	51.43	82.35
CDY65907	Canola	cytosol, endoplasmic reticulum, golgi	60.41	82.22
CDY40147	Canola	cytosol, endoplasmic reticulum, golgi	60.41	82.22
Bra018976.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	60.41	82.22
HORVU1Hr1G057530.2	Barley	endoplasmic reticulum, plasma membrane, plastid	71.43	81.78
CDY60554	Canola	endoplasmic reticulum	60.0	81.67
Bra030372.1-P	Field mustard	endoplasmic reticulum	60.0	81.67
CDX87924	Canola	endoplasmic reticulum	60.0	81.67
Bra040958.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	50.61	81.05
KRH02723	Soybean	endoplasmic reticulum	62.45	80.1
AT3G15710.1	Thale cress	endoplasmic reticulum	57.96	78.89
GSMUA_Achr8P30160_001	Banana	plasma membrane	57.96	78.89
Bra021131.1-P	Field mustard	endoplasmic reticulum	57.14	77.78
CDY21864	Canola	endoplasmic reticulum	57.14	77.78
CDY20147	Canola	endoplasmic reticulum	57.14	77.78
CDY47542	Canola	endoplasmic reticulum	56.73	77.22
CDX97698	Canola	cytosol, endoplasmic reticulum, golgi	55.51	75.56
CDY30100	Canola	cytosol, endoplasmic reticulum, golgi	55.51	75.56
Bra027214.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	55.1	75.0
VIT_11s0016g05130.t01	Wine grape	cytosol, golgi, plasma membrane	54.69	74.44
PGSC0003DMT400048805	Potato	plastid	56.73	68.14
CDY47544	Canola	extracellular	33.06	65.85
KRH54892	Soybean	cytosol, extracellular, plasma membrane	23.27	57.58
CDX98638	Canola	extracellular	13.88	55.74
CDY37720	Canola	extracellular	13.88	55.74
CDX87773	Canola	golgi	14.69	53.73
CDY30660	Canola	plasma membrane	26.12	25.4
CDX87925	Canola	cytosol	3.67	5.36

Protein Annotations

MapMan:18.10.1.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006465	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G109380	EnsemblPlants:HORVU5Hr1G109380.2	InterPro:LexA/Signal_pep-like_sf	UniProt:M0WEG2
PFAM:PF00717	PRINTS:PR00728	PANTHER:PTHR10806	PANTHER:PTHR10806:SF16	InterPro:Peptidase_S24_S26A/B/C	InterPro:Peptidase_S26B
SUPFAM:SSF51306	TIGRFAMs:TIGR02228	UniParc:UPI0002969667	:	:	:

Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:M0WEG2]

Coordinates

chrchr5H:-:629820625..629823356

Molecular Weight (calculated)

27137.4 Da

IEP (calculated)

9.827

GRAVY (calculated)

-0.117

Length

245 amino acids

Sequence
(BLAST)

001: MFCDSKCFRA GERKPSGCRP IPIPRTETGP PTCTKPRRAG PEANTEHPRG SSPEKRIAPR RAPGEMGFIG DQVESIRSMQ LRQVLSQIIS LGMIVTSALI
101: IWKGLMVATG SESPVVVVLS GSMEPGFKRG DILFLRMSKE PIRTGEIVVF NVDGREIPIV HRVIKVHERQ ESAEVDILTK GDNNFGDDRL LYAHGQLWLQ
201: QHHIMGRAVG YLPHVGWVTI VMTEKPIIKY LLIGALGLLV ITSKD

Best Arabidopsis Sequence Match ( AT1G52600.1 )
(BLAST)

001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD

Arabidopsis Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.