Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- golgi 2
- endoplasmic reticulum 3
- extracellular 1
- vacuole 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018976.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 100.0 | 100.0 |
| CDY40147 | Canola | cytosol, endoplasmic reticulum, golgi | 100.0 | 100.0 |
| CDX87924 | Canola | endoplasmic reticulum | 98.33 | 98.33 |
| CDY60554 | Canola | endoplasmic reticulum | 98.33 | 98.33 |
| AT1G52600.1 | Thale cress | endoplasmic reticulum | 97.78 | 97.78 |
| KRH56207 | Soybean | endoplasmic reticulum | 94.44 | 94.44 |
| Solyc12g006540.1.1 | Tomato | nucleus | 93.33 | 93.33 |
| CDY70157 | Canola | endoplasmic reticulum, golgi, vacuole | 78.89 | 92.81 |
| VIT_09s0002g06550.t01 | Wine grape | endoplasmic reticulum | 92.22 | 92.22 |
| CDY47542 | Canola | endoplasmic reticulum | 90.56 | 90.56 |
| CDY21864 | Canola | endoplasmic reticulum | 90.56 | 90.56 |
| CDY20147 | Canola | endoplasmic reticulum | 90.56 | 90.56 |
| KRH02723 | Soybean | endoplasmic reticulum | 93.33 | 87.96 |
| GSMUA_Achr2P06860_001 | Banana | endoplasmic reticulum | 86.67 | 86.67 |
| Os05t0297900-01 | Rice | plasma membrane | 86.11 | 86.11 |
| CDX97698 | Canola | cytosol, endoplasmic reticulum, golgi | 85.56 | 85.56 |
| CDY30100 | Canola | cytosol, endoplasmic reticulum, golgi | 85.56 | 85.56 |
| Os06t0273800-02 | Rice | endoplasmic reticulum, golgi, plasma membrane | 85.56 | 85.56 |
| EES19438 | Sorghum | endoplasmic reticulum | 85.0 | 85.0 |
| Zm00001d037926_P001 | Maize | endoplasmic reticulum | 84.44 | 84.44 |
| Zm00001d009866_P004 | Maize | endoplasmic reticulum | 84.44 | 84.44 |
| EES16720 | Sorghum | plasma membrane | 82.78 | 82.78 |
| GSMUA_Achr8P30160_001 | Banana | plasma membrane | 80.56 | 80.56 |
| CDY47544 | Canola | extracellular | 50.0 | 73.17 |
| PGSC0003DMT400048805 | Potato | plastid | 82.78 | 73.04 |
| HORVU1Hr1G057530.2 | Barley | endoplasmic reticulum, plasma membrane, plastid | 83.33 | 70.09 |
| EES07797 | Sorghum | endoplasmic reticulum | 67.78 | 67.03 |
| CDX87773 | Canola | golgi | 22.78 | 61.19 |
| HORVU5Hr1G109380.2 | Barley | cytosol, golgi, plasma membrane, plastid | 82.22 | 60.41 |
| CDY37720 | Canola | extracellular | 19.44 | 57.38 |
| CDX98638 | Canola | extracellular | 19.44 | 57.38 |
| Zm00001d032189_P001 | Maize | extracellular, mitochondrion | 20.56 | 46.25 |
| Zm00001d051850_P001 | Maize | endoplasmic reticulum | 65.0 | 36.68 |
| CDY30660 | Canola | plasma membrane | 36.67 | 26.19 |
| CDX87925 | Canola | cytosol | 6.11 | 6.55 |
Protein Annotations
| MapMan:18.10.1.1.1 | GO:A0A078JKM2 | UniProt:A0A078JKM2 | ProteinID:CDY40147.1 | EnsemblPlants:CDY65907 | ProteinID:CDY65907 |
| ProteinID:CDY65907.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006465 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00050986001 | InterPro:LexA/Signal_pep-like_sf | PFAM:PF00717 | PRINTS:PR00728 |
| PANTHER:PTHR10806 | PANTHER:PTHR10806:SF16 | InterPro:Peptidase_S24_S26A/B/C | InterPro:Peptidase_S26B | SUPFAM:SSF51306 | TIGRFAMs:TIGR02228 |
| UniParc:UPI000253E89B | : | : | : | : | : |
Description
BnaA06g01890DSignal peptidase I [Source:UniProtKB/TrEMBL;Acc:A0A078JKM2]
Coordinates
chrLK034996:-:8288..9797
Molecular Weight (calculated)
19994.8 Da
IEP (calculated)
7.162
GRAVY (calculated)
0.279
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYIGETIDS IKSIQIRQLL TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QQWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QQWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
Arabidopsis Description
Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.