Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07797 | Sorghum | endoplasmic reticulum | 44.2 | 77.47 |
| Zm00001d037926_P001 | Maize | endoplasmic reticulum | 39.81 | 70.56 |
| GSMUA_Achr2P06860_001 | Banana | endoplasmic reticulum | 39.5 | 70.0 |
| Zm00001d009866_P004 | Maize | endoplasmic reticulum | 39.19 | 69.44 |
| CDY70157 | Canola | endoplasmic reticulum, golgi, vacuole | 33.23 | 69.28 |
| Bra040958.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 32.6 | 67.97 |
| GSMUA_Achr8P30160_001 | Banana | plasma membrane | 38.24 | 67.78 |
| KRH56207 | Soybean | endoplasmic reticulum | 37.62 | 66.67 |
| KRH09745 | Soybean | extracellular, golgi, vacuole | 31.97 | 66.67 |
| VIT_09s0002g06550.t01 | Wine grape | endoplasmic reticulum | 37.3 | 66.11 |
| Solyc12g006540.1.1 | Tomato | nucleus | 36.99 | 65.56 |
| Bra030372.1-P | Field mustard | endoplasmic reticulum | 36.99 | 65.56 |
| CDY60554 | Canola | endoplasmic reticulum | 36.99 | 65.56 |
| AT1G52600.1 | Thale cress | endoplasmic reticulum | 36.99 | 65.56 |
| CDX87924 | Canola | endoplasmic reticulum | 36.68 | 65.0 |
| Bra018976.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 36.68 | 65.0 |
| CDY65907 | Canola | cytosol, endoplasmic reticulum, golgi | 36.68 | 65.0 |
| CDY40147 | Canola | cytosol, endoplasmic reticulum, golgi | 36.68 | 65.0 |
| CDY47542 | Canola | endoplasmic reticulum | 35.42 | 62.78 |
| KRH02723 | Soybean | endoplasmic reticulum | 37.3 | 62.3 |
| VIT_11s0016g05130.t01 | Wine grape | cytosol, golgi, plasma membrane | 35.11 | 62.22 |
| AT3G15710.1 | Thale cress | endoplasmic reticulum | 34.8 | 61.67 |
| Bra021131.1-P | Field mustard | endoplasmic reticulum | 34.8 | 61.67 |
| CDY21864 | Canola | endoplasmic reticulum | 34.8 | 61.67 |
| CDY20147 | Canola | endoplasmic reticulum | 34.8 | 61.67 |
| CDY30100 | Canola | cytosol, endoplasmic reticulum, golgi | 33.86 | 60.0 |
| CDX97698 | Canola | cytosol, endoplasmic reticulum, golgi | 33.86 | 60.0 |
| Bra027214.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 33.86 | 60.0 |
| CDY47544 | Canola | extracellular | 22.26 | 57.72 |
| PGSC0003DMT400048805 | Potato | plastid | 35.11 | 54.9 |
| CDX98638 | Canola | extracellular | 10.34 | 54.1 |
| CDX87773 | Canola | golgi | 11.29 | 53.73 |
| KRH54892 | Soybean | cytosol, extracellular, plasma membrane | 16.61 | 53.54 |
| CDY37720 | Canola | extracellular | 10.03 | 52.46 |
| Zm00001d032189_P001 | Maize | extracellular, mitochondrion | 10.03 | 40.0 |
| CDY30660 | Canola | plasma membrane | 18.18 | 23.02 |
| CDX87925 | Canola | cytosol | 1.88 | 3.57 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.10.1.1.1 | Gene3D:2.10.109.10 | UniProt:A0A1D6QAA1 | ProteinID:AQK55264.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006465 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR002885 | InterPro:IPR011990 | InterPro:LexA/Signal_pep-like_sf | PFAM:PF00717 |
| PFAM:PF12854 | PRINTS:PR00728 | PFscan:PS51375 | PANTHER:PTHR10806 | PANTHER:PTHR10806:SF16 | InterPro:Pentatricopeptide_repeat |
| InterPro:Peptidase_S24_S26A/B/C | InterPro:Peptidase_S26B | SUPFAM:SSF51306 | TIGRFAMs:TIGR00756 | TIGRFAMs:TIGR02228 | InterPro:TPR-like_helical_dom_sf |
| UniParc:UPI0008446959 | EnsemblPlantsGene:Zm00001d051850 | EnsemblPlants:Zm00001d051850_P001 | EnsemblPlants:Zm00001d051850_T001 | SEG:seg | : |
Description
Peptidase S24/S26A/S26B/S26C family protein
Coordinates
chr4:+:172394952..172403232
Molecular Weight (calculated)
35027.7 Da
IEP (calculated)
7.024
GRAVY (calculated)
0.019
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLRSVLES IQAMQIRPVV AQIITLGMIL TSALILWKGL VVVTGSESPV VVVLSGSMEP GFRKGDVLFL HMNKDPVRTG DIVVFNVEGR DIPIVHRVIK
101: VHERHDTVDS DILTKGDNNP GDDRVLYAHG QLWLQRQHII GRAVGYLPYA GWLTIVMTEK PVLKEGHEVR GHVCAGLHGM GKEGIRADTV TWNPLIHGLF
201: KDARVKEAAQ LFTEMVATQP GVEDIHPLRL SALGQYSAPK KVFKPNENMK NFCQGSVQST DLLNEICRIG VCCHHCDQVD ETADHLLTNC AYTVLLKIDP
301: LITGGAQTVS GLVQKGLNS
101: VHERHDTVDS DILTKGDNNP GDDRVLYAHG QLWLQRQHII GRAVGYLPYA GWLTIVMTEK PVLKEGHEVR GHVCAGLHGM GKEGIRADTV TWNPLIHGLF
201: KDARVKEAAQ LFTEMVATQP GVEDIHPLRL SALGQYSAPK KVFKPNENMK NFCQGSVQST DLLNEICRIG VCCHHCDQVD ETADHLLTNC AYTVLLKIDP
301: LITGGAQTVS GLVQKGLNS
001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
Arabidopsis Description
Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.