Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- plasma membrane 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P06860_001 | Banana | endoplasmic reticulum | 61.62 | 33.89 |
| KRH56207 | Soybean | endoplasmic reticulum | 61.62 | 33.89 |
| Zm00001d009866_P004 | Maize | endoplasmic reticulum | 60.61 | 33.33 |
| EES19438 | Sorghum | endoplasmic reticulum | 60.61 | 33.33 |
| Zm00001d037926_P001 | Maize | endoplasmic reticulum | 59.6 | 32.78 |
| Os06t0273800-02 | Rice | endoplasmic reticulum, golgi, plasma membrane | 59.6 | 32.78 |
| EES16720 | Sorghum | plasma membrane | 58.59 | 32.22 |
| Os05t0297900-01 | Rice | plasma membrane | 58.59 | 32.22 |
| KRH02723 | Soybean | endoplasmic reticulum | 60.61 | 31.41 |
| GSMUA_Achr8P30160_001 | Banana | plasma membrane | 56.57 | 31.11 |
| KRH09745 | Soybean | extracellular, golgi, vacuole | 46.46 | 30.07 |
| EES07797 | Sorghum | endoplasmic reticulum | 54.55 | 29.67 |
| VIT_11s0016g05130.t01 | Wine grape | cytosol, golgi, plasma membrane | 53.54 | 29.44 |
| HORVU1Hr1G057530.2 | Barley | endoplasmic reticulum, plasma membrane, plastid | 59.6 | 27.57 |
| HORVU5Hr1G109380.2 | Barley | cytosol, golgi, plasma membrane, plastid | 57.58 | 23.27 |
| TraesCS3D01G089300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 32.32 | 18.93 |
| TraesCS6D01G314000.1 | Wheat | cytosol | 26.26 | 18.44 |
| TraesCS6B01G363400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 31.31 | 18.34 |
| TraesCS6D01G313700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 31.31 | 18.34 |
| TraesCS6A01G334600.1 | Wheat | golgi | 30.3 | 17.75 |
| TraesCS6D01G312200.1 | Wheat | golgi | 30.3 | 17.75 |
| TraesCS6A01G333000.2 | Wheat | extracellular, golgi | 25.25 | 17.24 |
| TraesCS6D01G311800.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 29.29 | 17.16 |
| Zm00001d051850_P001 | Maize | endoplasmic reticulum | 53.54 | 16.61 |
| TraesCS6D01G312400.1 | Wheat | endoplasmic reticulum, golgi | 25.25 | 16.45 |
| Zm00001d032189_P001 | Maize | extracellular, mitochondrion | 6.06 | 7.5 |
Protein Annotations
| MapMan:18.10.1.1.1 | UniProt:A0A0R0JK02 | EMBL:ACUP02003593 | EnsemblPlantsGene:GLYMA_06G217100 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0006465 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlants:KRH54892 |
| ProteinID:KRH54892 | ProteinID:KRH54892.1 | InterPro:LexA/Signal_pep-like_sf | PFAM:PF00717 | PANTHER:PTHR10806 | PANTHER:PTHR10806:SF16 |
| InterPro:Peptidase_S24_S26A/B/C | InterPro:Peptidase_S26B | SUPFAM:SSF51306 | TIGRFAMs:TIGR02228 | TMHMM:TMhelix | UniParc:UPI0006ED513E |
Description
hypothetical protein
Coordinates
chr6:-:22851281..22851816
Molecular Weight (calculated)
11213.0 Da
IEP (calculated)
8.223
GRAVY (calculated)
0.535
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MDWVSKTIKP MQFRQNLTEL ISVGLIASFT LVMWKGLMCV TGSGTPVVVV ISGSMEPGFR RGDILFLHMS KDPIRAGDIV VYNLDVCIIP HYNFVFYWL
001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
Arabidopsis Description
Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.