Factsheet for TraesCS6D01G313700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G334600.1	Wheat	golgi	96.45	96.45
TraesCS6D01G314000.1	Wheat	cytosol	78.11	93.62
TraesCS6D01G311800.1	Wheat	endoplasmic reticulum, golgi, vacuole	84.02	84.02
TraesCS6D01G312400.1	Wheat	endoplasmic reticulum, golgi	75.15	83.55
TraesCS3D01G089300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.43	83.43
TraesCS6D01G312200.1	Wheat	golgi	82.84	82.84
KRH09745	Soybean	extracellular, golgi, vacuole	41.42	45.75
KRH56207	Soybean	endoplasmic reticulum	48.52	45.56
Bra040958.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	40.83	45.1
TraesCS1D01G238300.1	Wheat	endoplasmic reticulum	47.93	45.0
VIT_09s0002g06550.t01	Wine grape	endoplasmic reticulum	47.34	44.44
Solyc12g006540.1.1	Tomato	nucleus	46.15	43.33
Bra021131.1-P	Field mustard	endoplasmic reticulum	45.56	42.78
KRH02723	Soybean	endoplasmic reticulum	47.93	42.41
AT1G52600.1	Thale cress	endoplasmic reticulum	44.97	42.22
TraesCS5D01G466200.1	Wheat	endoplasmic reticulum	44.97	42.22
Bra018976.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	44.97	42.22
AT3G15710.1	Thale cress	endoplasmic reticulum	44.97	42.22
Bra030372.1-P	Field mustard	endoplasmic reticulum	44.38	41.67
Bra027214.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	43.79	41.11
VIT_11s0016g05130.t01	Wine grape	cytosol, golgi, plasma membrane	43.2	40.56
PGSC0003DMT400048805	Potato	plastid	46.15	38.24
KRH54892	Soybean	cytosol, extracellular, plasma membrane	18.34	31.31
CDX87925	Canola	cytosol	0.59	0.6

Protein Annotations

MapMan:18.10.1.1.1	Gene3D:2.10.109.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006465
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
GO:GO:0019538	InterPro:LexA/Signal_pep-like_sf	PFAM:PF00717	PRINTS:PR00728	PANTHER:PTHR10806	PANTHER:PTHR10806:SF16
InterPro:Peptidase_S24_S26A/B/C	InterPro:Peptidase_S26B	SUPFAM:SSF51306	TIGRFAMs:TIGR02228	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G313700
EnsemblPlants:TraesCS6D01G313700.1	TIGR:cd06530	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:+:422215387..422216441

Molecular Weight (calculated)

19038.6 Da

IEP (calculated)

7.926

GRAVY (calculated)

0.245

Length

169 amino acids

Sequence
(BLAST)

001: MKIRHVLTQS VTFLVMVVAL LVLVPEGIML VTGVKTPAMA VLSESMEPGI KKGDMVFVHN MSNEPFRLGE IILFKVDGFE HPVVHRVIKV HENRDTGEIR
101: ILTKGDNNLV DDRFLYASGQ LWLQPHDIIG RVAGYLPYAG WPTVFISVSY KMLLNGRSTT TPEVYWVTM

Best Arabidopsis Sequence Match ( AT1G52600.1 )
(BLAST)

001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD

Arabidopsis Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.