Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 3
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021131.1-P | Field mustard | endoplasmic reticulum | 89.44 | 89.44 |
| CDY20147 | Canola | endoplasmic reticulum | 89.44 | 89.44 |
| CDY21864 | Canola | endoplasmic reticulum | 89.44 | 89.44 |
| AT1G52600.1 | Thale cress | endoplasmic reticulum | 87.22 | 87.22 |
| KRH56207 | Soybean | endoplasmic reticulum | 87.22 | 87.22 |
| Bra027214.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 86.11 | 86.11 |
| CDY30100 | Canola | cytosol, endoplasmic reticulum, golgi | 86.11 | 86.11 |
| CDX97698 | Canola | cytosol, endoplasmic reticulum, golgi | 85.56 | 85.56 |
| VIT_09s0002g06550.t01 | Wine grape | endoplasmic reticulum | 85.56 | 85.56 |
| Solyc12g006540.1.1 | Tomato | nucleus | 85.0 | 85.0 |
| KRH02723 | Soybean | endoplasmic reticulum | 86.11 | 81.15 |
| EES19438 | Sorghum | endoplasmic reticulum | 80.56 | 80.56 |
| Os06t0273800-02 | Rice | endoplasmic reticulum, golgi, plasma membrane | 80.0 | 80.0 |
| Zm00001d037926_P001 | Maize | endoplasmic reticulum | 80.0 | 80.0 |
| Os05t0297900-01 | Rice | plasma membrane | 80.0 | 80.0 |
| GSMUA_Achr2P06860_001 | Banana | endoplasmic reticulum | 80.0 | 80.0 |
| Zm00001d009866_P004 | Maize | endoplasmic reticulum | 78.89 | 78.89 |
| EES16720 | Sorghum | plasma membrane | 78.33 | 78.33 |
| GSMUA_Achr8P30160_001 | Banana | plasma membrane | 74.44 | 74.44 |
| PGSC0003DMT400048805 | Potato | plastid | 77.22 | 68.14 |
| HORVU1Hr1G057530.2 | Barley | endoplasmic reticulum, plasma membrane, plastid | 77.78 | 65.42 |
| EES07797 | Sorghum | endoplasmic reticulum | 66.11 | 65.38 |
| HORVU5Hr1G109380.2 | Barley | cytosol, golgi, plasma membrane, plastid | 78.89 | 57.96 |
| TraesCS6D01G311800.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 43.33 | 46.15 |
| TraesCS6B01G363400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 43.33 | 46.15 |
| TraesCS6D01G314000.1 | Wheat | cytosol | 35.56 | 45.39 |
| TraesCS6D01G312200.1 | Wheat | golgi | 42.22 | 44.97 |
| TraesCS6D01G313700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 42.22 | 44.97 |
| TraesCS6A01G333000.2 | Wheat | extracellular, golgi | 36.11 | 44.83 |
| TraesCS6D01G312400.1 | Wheat | endoplasmic reticulum, golgi | 37.78 | 44.74 |
| TraesCS6A01G334600.1 | Wheat | golgi | 41.67 | 44.38 |
| Zm00001d032189_P001 | Maize | extracellular, mitochondrion | 19.44 | 43.75 |
| TraesCS3D01G089300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 40.56 | 43.2 |
| Zm00001d051850_P001 | Maize | endoplasmic reticulum | 61.67 | 34.8 |
Protein Annotations
| MapMan:18.10.1.1.1 | EntrezGene:820814 | UniProt:A0A178VNL0 | ProteinID:AEE75717.1 | ArrayExpress:AT3G15710 | EnsemblPlantsGene:AT3G15710 |
| RefSeq:AT3G15710 | TAIR:AT3G15710 | RefSeq:AT3G15710-TAIR-G | EnsemblPlants:AT3G15710.1 | TAIR:AT3G15710.1 | ProteinID:BAB02302.1 |
| EMBL:BT015149 | EMBL:BT015660 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005783 | GO:GO:0005787 |
| GO:GO:0005886 | GO:GO:0006465 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | InterPro:LexA/Signal_pep-like_sf |
| RefSeq:NP_566523.1 | ProteinID:OAP06432.1 | PFAM:PF00717 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00728 | PANTHER:PTHR10806 | PANTHER:PTHR10806:SF16 |
| InterPro:Peptidase_S24_S26A/B/C | InterPro:Peptidase_S26B | UniProt:Q9LW08 | MEROPS:S26.A03 | SUPFAM:SSF51306 | TIGRFAMs:TIGR02228 |
| TMHMM:TMhelix | UniParc:UPI00000A4E2A | SEG:seg | : | : | : |
Description
Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:A0A178VNL0]
Coordinates
chr3:-:5323262..5324966
Molecular Weight (calculated)
19847.6 Da
IEP (calculated)
6.353
GRAVY (calculated)
0.407
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFIGETVDS IKSIKIRQVL TQAITLGMIV TSALIIWKAL ICVTGSESPV VVVLSESMEP GFQRGDILFL RMTDEPIRAG EIVVFSVDGR EIPIVHRAIK
101: VHERGDTKAV DVLTKGDNND IDDIGLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
101: VHERGDTKAV DVLTKGDNND IDDIGLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.