Factsheet for TraesCS6A01G333000.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G312400.1	Wheat	endoplasmic reticulum, golgi	92.41	88.16
TraesCS6D01G312200.1	Wheat	golgi	91.03	78.11
TraesCS6D01G311800.1	Wheat	endoplasmic reticulum, golgi, vacuole	90.34	77.51
TraesCS6B01G363400.1	Wheat	endoplasmic reticulum, golgi, vacuole	85.52	73.37
TraesCS6A01G334600.1	Wheat	golgi	84.83	72.78
Bra040958.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	46.9	44.44
KRH09745	Soybean	extracellular, golgi, vacuole	46.21	43.79
TraesCS1A01G233200.1	Wheat	golgi	50.34	40.56
KRH56207	Soybean	endoplasmic reticulum	49.66	40.0
Solyc12g006540.1.1	Tomato	nucleus	49.66	40.0
VIT_09s0002g06550.t01	Wine grape	endoplasmic reticulum	48.97	39.44
TraesCS5A01G455600.1	Wheat	endoplasmic reticulum	48.97	39.44
AT1G52600.1	Thale cress	endoplasmic reticulum	47.59	38.33
Bra018976.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	46.9	37.78
Bra030372.1-P	Field mustard	endoplasmic reticulum	46.21	37.22
Bra021131.1-P	Field mustard	endoplasmic reticulum	46.21	37.22
KRH02723	Soybean	endoplasmic reticulum	48.97	37.17
VIT_11s0016g05130.t01	Wine grape	cytosol, golgi, plasma membrane	44.83	36.11
AT3G15710.1	Thale cress	endoplasmic reticulum	44.83	36.11
Bra027214.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	44.14	35.56
PGSC0003DMT400048805	Potato	plastid	49.66	35.29
KRH54892	Soybean	cytosol, extracellular, plasma membrane	17.24	25.25
CDX87925	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:18.10.1.1.1	Gene3D:2.10.109.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006465
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
GO:GO:0019538	InterPro:LexA/Signal_pep-like_sf	PFAM:PF00717	PRINTS:PR00728	PANTHER:PTHR10806	PANTHER:PTHR10806:SF16
InterPro:Peptidase_S24_S26A/B/C	InterPro:Peptidase_S26B	SUPFAM:SSF51306	SignalP:SignalP-noTM	TIGRFAMs:TIGR02228	EnsemblPlantsGene:TraesCS6A01G333000
EnsemblPlants:TraesCS6A01G333000.2	TIGR:cd06530	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:564277901..564278860

Molecular Weight (calculated)

16264.9 Da

IEP (calculated)

6.508

GRAVY (calculated)

0.126

Length

145 amino acids

Sequence
(BLAST)

001: MVLALLVLVP EGMMLVTGVK SPAMAVLSES MEPAIKKGDM VFVHNMSNEP FREGEVVLFK VDGFEHPIVH RVIKVYEHRD TGEIRILTKG DNNSVDDRFL
101: YASGQLWLQP HDIIGRVACY LPYAGWPSVF ISEAYKVCKH ALYSG

Best Arabidopsis Sequence Match ( AT1G52600.1 )
(BLAST)

001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD

Arabidopsis Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.