Factsheet for Bra027214.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, cytosol

Predictor Summary:

plastid 3
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97698	Canola	cytosol, endoplasmic reticulum, golgi	99.44	99.44
Bra021131.1-P	Field mustard	endoplasmic reticulum	89.44	89.44
Bra030372.1-P	Field mustard	endoplasmic reticulum	86.67	86.67
Bra018976.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	86.11	86.11
AT3G15710.1	Thale cress	endoplasmic reticulum	86.11	86.11
KRH56207	Soybean	endoplasmic reticulum	85.56	85.56
Bra040958.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	72.22	84.97
VIT_09s0002g06550.t01	Wine grape	endoplasmic reticulum	83.89	83.89
Solyc12g006540.1.1	Tomato	nucleus	83.89	83.89
KRH02723	Soybean	endoplasmic reticulum	84.44	79.58
GSMUA_Achr2P06860_001	Banana	endoplasmic reticulum	78.33	78.33
Os05t0297900-01	Rice	plasma membrane	78.33	78.33
Zm00001d009866_P004	Maize	endoplasmic reticulum	76.67	76.67
Os06t0273800-02	Rice	endoplasmic reticulum, golgi, plasma membrane	76.11	76.11
EES19438	Sorghum	endoplasmic reticulum	76.11	76.11
Zm00001d037926_P001	Maize	endoplasmic reticulum	75.56	75.56
EES16720	Sorghum	plasma membrane	75.56	75.56
GSMUA_Achr8P30160_001	Banana	plasma membrane	75.0	75.0
PGSC0003DMT400048805	Potato	plastid	75.56	66.67
HORVU1Hr1G057530.2	Barley	endoplasmic reticulum, plasma membrane, plastid	76.11	64.02
EES07797	Sorghum	endoplasmic reticulum	64.44	63.74
HORVU5Hr1G109380.2	Barley	cytosol, golgi, plasma membrane, plastid	75.0	55.1
TraesCS6D01G314000.1	Wheat	cytosol	35.56	45.39
Zm00001d032189_P001	Maize	extracellular, mitochondrion	20.0	45.0
TraesCS6A01G333000.2	Wheat	extracellular, golgi	35.56	44.14
TraesCS6D01G312400.1	Wheat	endoplasmic reticulum, golgi	37.22	44.08
TraesCS6D01G311800.1	Wheat	endoplasmic reticulum, golgi, vacuole	41.11	43.79
TraesCS6D01G313700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	41.11	43.79
TraesCS6B01G363400.1	Wheat	endoplasmic reticulum, golgi, vacuole	41.11	43.79
TraesCS6A01G334600.1	Wheat	golgi	41.11	43.79
TraesCS3D01G089300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	40.56	43.2
TraesCS6D01G312200.1	Wheat	golgi	40.0	42.6
Zm00001d051850_P001	Maize	endoplasmic reticulum	60.0	33.86

Protein Annotations

MapMan:18.10.1.1.1	EnsemblPlantsGene:Bra027214	EnsemblPlants:Bra027214.1	EnsemblPlants:Bra027214.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006465	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	InterPro:LexA/Signal_pep-like_sf
UniProt:M4EEK2	PFAM:PF00717	PRINTS:PR00728	PANTHER:PTHR10806	PANTHER:PTHR10806:SF16	InterPro:Peptidase_S24_S26A/B/C
InterPro:Peptidase_S26B	MEROPS:S26.A03	SUPFAM:SSF51306	TIGRFAMs:TIGR02228	TMHMM:TMhelix	UniParc:UPI0002547941

Description

AT1G52600 (E=7e-088) | signal peptidase, putative

Coordinates

chrA05:+:19741831..19743025

Molecular Weight (calculated)

20039.1 Da

IEP (calculated)

7.726

GRAVY (calculated)

0.308

Length

180 amino acids

Sequence
(BLAST)

001: MGWIGETVDS IKSIKIRQLL TQAVTLGMIV TSALIIWKAM MCVTGTESPV VVVLSGSMEP GFQRGDILLL RMTKDPIRTG EIVVFKIDGR DIPIVHRVIE
101: VHERKTTGKV DVLTKGDNND VDDIDLYADG QMWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA MGLLVITSKD

Best Arabidopsis Sequence Match ( AT1G52600.1 )
(BLAST)

001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD

Arabidopsis Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.