Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- endoplasmic reticulum 4
- plastid 1
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70157 | Canola | endoplasmic reticulum, golgi, vacuole | 62.64 | 74.51 |
| Bra040958.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 61.54 | 73.2 |
| EES16720 | Sorghum | plasma membrane | 71.43 | 72.22 |
| EES19438 | Sorghum | endoplasmic reticulum | 71.43 | 72.22 |
| GSMUA_Achr2P06860_001 | Banana | endoplasmic reticulum | 70.88 | 71.67 |
| KRH09745 | Soybean | extracellular, golgi, vacuole | 59.34 | 70.59 |
| CDY47542 | Canola | endoplasmic reticulum | 68.13 | 68.89 |
| KRH56207 | Soybean | endoplasmic reticulum | 68.13 | 68.89 |
| VIT_09s0002g06550.t01 | Wine grape | endoplasmic reticulum | 67.58 | 68.33 |
| AT1G52600.1 | Thale cress | endoplasmic reticulum | 67.58 | 68.33 |
| CDX87924 | Canola | endoplasmic reticulum | 67.03 | 67.78 |
| GSMUA_Achr8P30160_001 | Banana | plasma membrane | 67.03 | 67.78 |
| Bra018976.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 67.03 | 67.78 |
| CDY65907 | Canola | cytosol, endoplasmic reticulum, golgi | 67.03 | 67.78 |
| CDY40147 | Canola | cytosol, endoplasmic reticulum, golgi | 67.03 | 67.78 |
| Bra030372.1-P | Field mustard | endoplasmic reticulum | 66.48 | 67.22 |
| CDY60554 | Canola | endoplasmic reticulum | 66.48 | 67.22 |
| Solyc12g006540.1.1 | Tomato | nucleus | 65.93 | 66.67 |
| AT3G15710.1 | Thale cress | endoplasmic reticulum | 65.38 | 66.11 |
| VIT_11s0016g05130.t01 | Wine grape | cytosol, golgi, plasma membrane | 64.84 | 65.56 |
| CDY21864 | Canola | endoplasmic reticulum | 64.29 | 65.0 |
| CDY20147 | Canola | endoplasmic reticulum | 64.29 | 65.0 |
| Bra021131.1-P | Field mustard | endoplasmic reticulum | 64.29 | 65.0 |
| CDY30100 | Canola | cytosol, endoplasmic reticulum, golgi | 63.74 | 64.44 |
| CDX97698 | Canola | cytosol, endoplasmic reticulum, golgi | 63.74 | 64.44 |
| Bra027214.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 63.74 | 64.44 |
| KRH02723 | Soybean | endoplasmic reticulum | 67.58 | 64.4 |
| CDY47544 | Canola | extracellular | 39.56 | 58.54 |
| PGSC0003DMT400048805 | Potato | plastid | 63.19 | 56.37 |
| KRH54892 | Soybean | cytosol, extracellular, plasma membrane | 29.67 | 54.55 |
| CDX98638 | Canola | extracellular | 17.58 | 52.46 |
| CDX87773 | Canola | golgi | 19.23 | 52.24 |
| CDY37720 | Canola | extracellular | 16.48 | 49.18 |
| Zm00001d051850_P001 | Maize | endoplasmic reticulum | 77.47 | 44.2 |
| CDY30660 | Canola | plasma membrane | 32.97 | 23.81 |
| CDX87925 | Canola | cytosol | 3.85 | 4.17 |
Protein Annotations
| MapMan:18.10.1.1.1 | EntrezGene:8055349 | UniProt:C5XWN4 | EnsemblPlants:EES07797 | ProteinID:EES07797 | ProteinID:EES07797.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005787 | GO:GO:0006465 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:LexA/Signal_pep-like_sf | PFAM:PF00717 | PRINTS:PR00728 | PANTHER:PTHR10806 | PANTHER:PTHR10806:SF16 | InterPro:Peptidase_S24_S26A/B/C |
| InterPro:Peptidase_S26B | EnsemblPlantsGene:SORBI_3004G354100 | SUPFAM:SSF51306 | TIGRFAMs:TIGR02228 | TMHMM:TMhelix | UniParc:UPI0001A86182 |
| RefSeq:XP_002454821.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:68192394..68195267
Molecular Weight (calculated)
20441.5 Da
IEP (calculated)
8.920
GRAVY (calculated)
0.232
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLRNMVEP IRTMQIRPVL AQIITLGMIL TSALIIWKGL IIVTGSESPV VVVLSESMEP GFRRGDILFL HMNKDPVRTG DIVVFNIEGR DIPIVHRVIK
101: VHERHGMAEF DVLTKGDNNR DDDRMGMLYA NGQLWLQRQH IIGRAVGYLP YAGWLTIAMT EKPVLKYLLI GALGLLVVAS KE
101: VHERHGMAEF DVLTKGDNNR DDDRMGMLYA NGQLWLQRQH IIGRAVGYLP YAGWLTIAMT EKPVLKYLLI GALGLLVVAS KE
001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
Arabidopsis Description
Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.