Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98638 | Canola | extracellular | 95.08 | 95.08 |
| CDX87773 | Canola | golgi | 31.15 | 28.36 |
| CDY47544 | Canola | extracellular | 52.46 | 26.02 |
| CDY70157 | Canola | endoplasmic reticulum, golgi, vacuole | 52.46 | 20.91 |
| GSMUA_Achr2P06860_001 | Banana | endoplasmic reticulum | 59.02 | 20.0 |
| CDY30100 | Canola | cytosol, endoplasmic reticulum, golgi | 59.02 | 20.0 |
| CDX87924 | Canola | endoplasmic reticulum | 57.38 | 19.44 |
| CDY65907 | Canola | cytosol, endoplasmic reticulum, golgi | 57.38 | 19.44 |
| CDY40147 | Canola | cytosol, endoplasmic reticulum, golgi | 57.38 | 19.44 |
| CDY21864 | Canola | endoplasmic reticulum | 57.38 | 19.44 |
| CDY20147 | Canola | endoplasmic reticulum | 57.38 | 19.44 |
| CDX97698 | Canola | cytosol, endoplasmic reticulum, golgi | 57.38 | 19.44 |
| CDY60554 | Canola | endoplasmic reticulum | 55.74 | 18.89 |
| EES16720 | Sorghum | plasma membrane | 55.74 | 18.89 |
| Os06t0273800-02 | Rice | endoplasmic reticulum, golgi, plasma membrane | 55.74 | 18.89 |
| GSMUA_Achr8P30160_001 | Banana | plasma membrane | 55.74 | 18.89 |
| Os05t0297900-01 | Rice | plasma membrane | 55.74 | 18.89 |
| Zm00001d037926_P001 | Maize | endoplasmic reticulum | 54.1 | 18.33 |
| Zm00001d009866_P004 | Maize | endoplasmic reticulum | 54.1 | 18.33 |
| EES19438 | Sorghum | endoplasmic reticulum | 54.1 | 18.33 |
| CDY47542 | Canola | endoplasmic reticulum | 52.46 | 17.78 |
| EES07797 | Sorghum | endoplasmic reticulum | 49.18 | 16.48 |
| HORVU1Hr1G057530.2 | Barley | endoplasmic reticulum, plasma membrane, plastid | 55.74 | 15.89 |
| HORVU5Hr1G109380.2 | Barley | cytosol, golgi, plasma membrane, plastid | 55.74 | 13.88 |
| Zm00001d032189_P001 | Maize | extracellular, mitochondrion | 16.39 | 12.5 |
| CDY30660 | Canola | plasma membrane | 49.18 | 11.9 |
| Zm00001d051850_P001 | Maize | endoplasmic reticulum | 52.46 | 10.03 |
| CDX87925 | Canola | cytosol | 1.64 | 0.6 |
Protein Annotations
| EnsemblPlants:CDY37720 | EnsemblPlantsGene:GSBRNA2T00064620001 | GO:A0A078HHA1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0006465 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:Peptidase_S26B | PANTHER:PTHR10806 | PANTHER:PTHR10806:SF16 | ProteinID:CDY37720 |
| ProteinID:CDY37720.1 | SignalP:SignalP-noTM | UniParc:UPI0004EDB416 | UniProt:A0A078HHA1 | MapMan:35.2 | : |
Description
BnaA04g19480DBnaA04g19480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHA1]
Coordinates
chrLK032406:+:206201..206806
Molecular Weight (calculated)
6849.8 Da
IEP (calculated)
11.161
GRAVY (calculated)
0.398
Length
61 amino acids
Sequence
(BLAST)
(BLAST)
1: MIVTSAMIIW KALMCVTGTE SPVVVVLSRS MEPAFKRSRD VPSSIVPSKF MRGRIHEKLM L
001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
Arabidopsis Description
Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.