Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0297900-01 | Rice | plasma membrane | 95.0 | 95.0 |
| EES19438 | Sorghum | endoplasmic reticulum | 94.44 | 94.44 |
| Zm00001d037926_P001 | Maize | endoplasmic reticulum | 94.44 | 94.44 |
| EES16720 | Sorghum | plasma membrane | 93.89 | 93.89 |
| Zm00001d009866_P004 | Maize | endoplasmic reticulum | 92.78 | 92.78 |
| GSMUA_Achr2P06860_001 | Banana | endoplasmic reticulum | 88.89 | 88.89 |
| KRH56207 | Soybean | endoplasmic reticulum | 87.22 | 87.22 |
| VIT_09s0002g06550.t01 | Wine grape | endoplasmic reticulum | 86.67 | 86.67 |
| CDY70157 | Canola | endoplasmic reticulum, golgi, vacuole | 73.33 | 86.27 |
| Solyc12g006540.1.1 | Tomato | nucleus | 86.11 | 86.11 |
| Bra018976.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 85.56 | 85.56 |
| CDY40147 | Canola | cytosol, endoplasmic reticulum, golgi | 85.56 | 85.56 |
| CDY65907 | Canola | cytosol, endoplasmic reticulum, golgi | 85.56 | 85.56 |
| CDX87924 | Canola | endoplasmic reticulum | 85.0 | 85.0 |
| Bra030372.1-P | Field mustard | endoplasmic reticulum | 85.0 | 85.0 |
| AT1G52600.1 | Thale cress | endoplasmic reticulum | 85.0 | 85.0 |
| CDY60554 | Canola | endoplasmic reticulum | 85.0 | 85.0 |
| Bra040958.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 72.22 | 84.97 |
| KRH09745 | Soybean | extracellular, golgi, vacuole | 71.67 | 84.31 |
| GSMUA_Achr8P30160_001 | Banana | plasma membrane | 82.22 | 82.22 |
| KRH02723 | Soybean | endoplasmic reticulum | 86.11 | 81.15 |
| CDY47542 | Canola | endoplasmic reticulum | 80.56 | 80.56 |
| AT3G15710.1 | Thale cress | endoplasmic reticulum | 80.0 | 80.0 |
| CDY21864 | Canola | endoplasmic reticulum | 78.89 | 78.89 |
| CDY20147 | Canola | endoplasmic reticulum | 78.89 | 78.89 |
| Bra021131.1-P | Field mustard | endoplasmic reticulum | 78.89 | 78.89 |
| CDY30100 | Canola | cytosol, endoplasmic reticulum, golgi | 76.67 | 76.67 |
| CDX97698 | Canola | cytosol, endoplasmic reticulum, golgi | 76.67 | 76.67 |
| Bra027214.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 76.11 | 76.11 |
| VIT_11s0016g05130.t01 | Wine grape | cytosol, golgi, plasma membrane | 75.56 | 75.56 |
| PGSC0003DMT400048805 | Potato | plastid | 79.44 | 70.1 |
| CDY47544 | Canola | extracellular | 45.0 | 65.85 |
| KRH54892 | Soybean | cytosol, extracellular, plasma membrane | 32.78 | 59.6 |
| CDX98638 | Canola | extracellular | 20.0 | 59.02 |
| CDY37720 | Canola | extracellular | 18.89 | 55.74 |
| CDX87773 | Canola | golgi | 20.0 | 53.73 |
| CDY30660 | Canola | plasma membrane | 33.89 | 24.21 |
| CDX87925 | Canola | cytosol | 5.56 | 5.95 |
Protein Annotations
| MapMan:18.10.1.1.1 | EntrezGene:4340738 | EMBL:AK058911 | EMBL:AK102635 | EMBL:AK106215 | EMBL:AK111407 |
| ProteinID:BAD69161.1 | ProteinID:BAF19285.1 | ProteinID:BAS97212.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005787 | GO:GO:0006465 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | InterPro:LexA/Signal_pep-like_sf | EnsemblPlantsGene:Os06g0273800 | EnsemblPlants:Os06t0273800-02 |
| PFAM:PF00717 | PRINTS:PR00728 | PANTHER:PTHR10806 | PANTHER:PTHR10806:SF16 | InterPro:Peptidase_S24_S26A/B/C | InterPro:Peptidase_S26B |
| UniProt:Q5VN14 | MEROPS:S26.010 | SUPFAM:SSF51306 | TIGRFAMs:TIGR02228 | TMHMM:TMhelix | UniParc:UPI0000458092 |
| RefSeq:XP_015644494.1 | RefSeq:XP_015644495.1 | SEG:seg | : | : | : |
Description
Type I Signal Peptidase 5, TYPE I SIGNAL PEPTIDASE 5Similar to Signal peptidase 18 subunit (Fragment). (Os06t0273800-01);Similar to Signal peptidase 18 subunit (Fragment). (Os06t0273800-02)
Coordinates
chr6:-:9256961..9262217
Molecular Weight (calculated)
19998.9 Da
IEP (calculated)
7.184
GRAVY (calculated)
0.389
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFIGDTIES IRSMQVRQVL AQIISLGMIV TSALIIWKGL IVVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRTG EIVVFNVDGR EIPIVHRVIK
101: VHERQESAEV DILTKGDNNF GDDRLLYAHG QLWLQQHHIM GRAVGFLPYV GWVTIIMTEK PIIKYLLIGA LGLLVITSKE
101: VHERQESAEV DILTKGDNNF GDDRLLYAHG QLWLQQHHIM GRAVGFLPYV GWVTIIMTEK PIIKYLLIGA LGLLVITSKE
001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
Arabidopsis Description
Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.