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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • golgi 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
EpiLoc:mitochondrion
MultiLoc:golgi
Plant-mPloc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
 endoplasmic reticulum: 27224218
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH56207 Soybean endoplasmic reticulum 93.19 98.89
VIT_09s0002g06550.t01 Wine grape endoplasmic reticulum 91.1 96.67
AT1G52600.1 Thale cress endoplasmic reticulum 89.01 94.44
CDY65907 Canola cytosol, endoplasmic reticulum, golgi 87.96 93.33
Solyc12g006540.1.1 Tomato nucleus 87.96 93.33
CDY40147 Canola cytosol, endoplasmic reticulum, golgi 87.96 93.33
Bra018976.1-P Field mustard cytosol, endoplasmic reticulum, golgi 87.96 93.33
Bra030372.1-P Field mustard endoplasmic reticulum 87.96 93.33
CDX87924 Canola endoplasmic reticulum 87.43 92.78
CDY60554 Canola endoplasmic reticulum 87.43 92.78
KRH09745 Soybean extracellular, golgi, vacuole 73.82 92.16
GSMUA_Achr2P06860_001 Banana endoplasmic reticulum 86.39 91.67
CDY70157 Canola endoplasmic reticulum, golgi, vacuole 72.77 90.85
Bra040958.1-P Field mustard endoplasmic reticulum, golgi, vacuole 71.73 89.54
CDY47542 Canola endoplasmic reticulum 82.72 87.78
CDY21864 Canola endoplasmic reticulum 82.2 87.22
CDY20147 Canola endoplasmic reticulum 82.2 87.22
EES19438 Sorghum endoplasmic reticulum 82.2 87.22
Bra021131.1-P Field mustard endoplasmic reticulum 82.2 87.22
Os05t0297900-01 Rice plasma membrane 81.68 86.67
Zm00001d037926_P001 Maize endoplasmic reticulum 81.68 86.67
Os06t0273800-02 Rice endoplasmic reticulum, golgi, plasma membrane 81.15 86.11
AT3G15710.1 Thale cress endoplasmic reticulum 81.15 86.11
Zm00001d009866_P004 Maize endoplasmic reticulum 80.63 85.56
Bra027214.1-P Field mustard cytosol, endoplasmic reticulum, golgi 79.58 84.44
EES16720 Sorghum plasma membrane 79.06 83.89
CDY30100 Canola cytosol, endoplasmic reticulum, golgi 79.06 83.89
CDX97698 Canola cytosol, endoplasmic reticulum, golgi 79.06 83.89
GSMUA_Achr8P30160_001 Banana plasma membrane 77.49 82.22
HORVU1Hr1G057530.2 Barley endoplasmic reticulum, plasma membrane, plastid 81.15 72.43
EES07797 Sorghum endoplasmic reticulum 64.4 67.58
HORVU5Hr1G109380.2 Barley cytosol, golgi, plasma membrane, plastid 80.1 62.45
KRH54892 Soybean cytosol, extracellular, plasma membrane 31.41 60.61
TraesCS6D01G314000.1 Wheat cytosol 37.7 51.06
TraesCS6A01G333000.2 Wheat extracellular, golgi 37.17 48.97
TraesCS6D01G312400.1 Wheat endoplasmic reticulum, golgi 38.74 48.68
TraesCS6D01G311800.1 Wheat endoplasmic reticulum, golgi, vacuole 42.93 48.52
TraesCS6D01G313700.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 42.41 47.93
TraesCS6A01G334600.1 Wheat golgi 41.88 47.34
TraesCS6B01G363400.1 Wheat endoplasmic reticulum, golgi, vacuole 41.88 47.34
Zm00001d032189_P001 Maize extracellular, mitochondrion 19.37 46.25
TraesCS6D01G312200.1 Wheat golgi 40.84 46.15
TraesCS3D01G089300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 39.79 44.97
Zm00001d051850_P001 Maize endoplasmic reticulum 62.3 37.3
Protein Annotations
EntrezGene:100797179MapMan:18.10.1.1.1EMBL:ACUP02010315EnsemblPlantsGene:GLYMA_17G055700GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005787
GO:GO:0006465GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019538UniProt:I1MSH9EnsemblPlants:KRH02723
ProteinID:KRH02723ProteinID:KRH02723.1InterPro:LexA/Signal_pep-like_sfPFAM:PF00717PRINTS:PR00728PANTHER:PTHR10806
PANTHER:PTHR10806:SF16InterPro:Peptidase_S24_S26A/B/CInterPro:Peptidase_S26BMEROPS:S26.010SUPFAM:SSF51306TIGRFAMs:TIGR02228
UniParc:UPI00023D636A:::::
Description
hypothetical protein
Coordinates
chr17:-:4227445..4231215
Molecular Weight (calculated)
21161.3 Da
IEP (calculated)
7.163
GRAVY (calculated)
0.289
Length
191 amino acids
Sequence
(BLAST)
001: MGDRKEAIAI TMGWIGESVD SIKSLQIRQV LTQAVSLGMI VTSALIIWKA LMCITGSESP VVVVLSGSME PGFKRGDILF LHMSKDPIRA GEIVVFNVDG
101: REIPIVHRVI KVHEREDTGE VDVLTKGDNN YGDDRLLYAH GQLWLQRHHI MGRAVGFLPY VGWVTIIMTE KPIIKYILIG ALGLLVITSK D
Best Arabidopsis Sequence Match ( AT1G52600.1 )
(BLAST)
001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
Arabidopsis Description
Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.