Factsheet for Bra040958.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

plastid 1
mitochondrion 1
extracellular 4
endoplasmic reticulum 6
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70157	Canola	endoplasmic reticulum, golgi, vacuole	98.69	98.69
CDY47542	Canola	endoplasmic reticulum	92.81	78.89
Bra018976.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	92.16	78.33
Bra030372.1-P	Field mustard	endoplasmic reticulum	91.5	77.78
Solyc12g006540.1.1	Tomato	nucleus	90.2	76.67
KRH56207	Soybean	endoplasmic reticulum	90.2	76.67
VIT_09s0002g06550.t01	Wine grape	endoplasmic reticulum	88.24	75.0
GSMUA_Achr2P06860_001	Banana	endoplasmic reticulum	87.58	74.44
Bra021131.1-P	Field mustard	endoplasmic reticulum	85.62	72.78
Os06t0273800-02	Rice	endoplasmic reticulum, golgi, plasma membrane	84.97	72.22
Bra027214.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	84.97	72.22
KRH02723	Soybean	endoplasmic reticulum	89.54	71.73
Zm00001d037926_P001	Maize	endoplasmic reticulum	84.31	71.67
Zm00001d009866_P004	Maize	endoplasmic reticulum	84.31	71.67
EES16720	Sorghum	plasma membrane	84.31	71.67
Os05t0297900-01	Rice	plasma membrane	84.31	71.67
EES19438	Sorghum	endoplasmic reticulum	84.31	71.67
GSMUA_Achr8P30160_001	Banana	plasma membrane	80.39	68.33
PGSC0003DMT400048805	Potato	plastid	90.2	67.65
EES07797	Sorghum	endoplasmic reticulum	73.2	61.54
HORVU1Hr1G057530.2	Barley	endoplasmic reticulum, plasma membrane, plastid	83.01	59.35
HORVU5Hr1G109380.2	Barley	cytosol, golgi, plasma membrane, plastid	81.05	50.61
TraesCS6A01G333000.2	Wheat	extracellular, golgi	44.44	46.9
TraesCS6D01G314000.1	Wheat	cytosol	42.48	46.1
TraesCS6D01G312400.1	Wheat	endoplasmic reticulum, golgi	45.75	46.05
Zm00001d032189_P001	Maize	extracellular, mitochondrion	22.22	42.5
TraesCS6B01G363400.1	Wheat	endoplasmic reticulum, golgi, vacuole	45.75	41.42
TraesCS6D01G311800.1	Wheat	endoplasmic reticulum, golgi, vacuole	45.75	41.42
TraesCS6A01G334600.1	Wheat	golgi	45.1	40.83
TraesCS6D01G313700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	45.1	40.83
TraesCS6D01G312200.1	Wheat	golgi	44.44	40.24
TraesCS3D01G089300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	43.79	39.65
Zm00001d051850_P001	Maize	endoplasmic reticulum	67.97	32.6

Protein Annotations

MapMan:18.10.1.1.1	EnsemblPlantsGene:Bra040958	EnsemblPlants:Bra040958.1	EnsemblPlants:Bra040958.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006465	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	InterPro:LexA/Signal_pep-like_sf
UniProt:M4FIM9	PFAM:PF00717	PRINTS:PR00728	PANTHER:PTHR10806	PANTHER:PTHR10806:SF16	InterPro:Peptidase_S24_S26A/B/C
InterPro:Peptidase_S26B	MEROPS:S26.A04	SUPFAM:SSF51306	SignalP:SignalP-noTM	TIGRFAMs:TIGR02228	UniParc:UPI000253EADF
SEG:seg	:	:	:	:	:

Description

AT1G52600 (E=1e-071) | signal peptidase, putative

Coordinates

chrScaffold000338:-:9545..10566

Molecular Weight (calculated)

17080.2 Da

IEP (calculated)

8.502

GRAVY (calculated)

0.269

Length

153 amino acids

Sequence
(BLAST)

001: MIVTSSLIIW KALICVTGSE SPVVVVLSES MEPGFQRGDI LFLHMSKDPI RAGEIVVFNI DGRDIPIVHR VIKVHERKNT GEVDVLTKGD NNPGDDRLLY
101: AKGQVWLHRH HIMGRSVGFL PYVGWVTIIM TEKPIIKYIL IGALGLLVIS SRD

Best Arabidopsis Sequence Match ( AT1G52600.1 )
(BLAST)

001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD

Arabidopsis Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.