CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 3
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70157	Canola	endoplasmic reticulum, golgi, vacuole	80.0	94.12
Bra040958.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	78.89	92.81
CDY65907	Canola	cytosol, endoplasmic reticulum, golgi	90.56	90.56
CDY40147	Canola	cytosol, endoplasmic reticulum, golgi	90.56	90.56
CDX87924	Canola	endoplasmic reticulum	90.0	90.0
CDY60554	Canola	endoplasmic reticulum	89.44	89.44
KRH56207	Soybean	endoplasmic reticulum	88.89	88.89
Solyc12g006540.1.1	Tomato	nucleus	87.22	87.22
VIT_09s0002g06550.t01	Wine grape	endoplasmic reticulum	86.67	86.67
CDY21864	Canola	endoplasmic reticulum	85.0	85.0
CDY20147	Canola	endoplasmic reticulum	85.0	85.0
CDY30100	Canola	cytosol, endoplasmic reticulum, golgi	82.78	82.78
CDX97698	Canola	cytosol, endoplasmic reticulum, golgi	82.78	82.78
KRH02723	Soybean	endoplasmic reticulum	87.78	82.72
Zm00001d009866_P004	Maize	endoplasmic reticulum	82.22	82.22
Os05t0297900-01	Rice	plasma membrane	81.67	81.67
GSMUA_Achr2P06860_001	Banana	endoplasmic reticulum	81.67	81.67
EES19438	Sorghum	endoplasmic reticulum	81.67	81.67
Zm00001d037926_P001	Maize	endoplasmic reticulum	81.11	81.11
EES16720	Sorghum	plasma membrane	81.11	81.11
Os06t0273800-02	Rice	endoplasmic reticulum, golgi, plasma membrane	80.56	80.56
GSMUA_Achr8P30160_001	Banana	plasma membrane	77.78	77.78
PGSC0003DMT400048805	Potato	plastid	77.78	68.63
CDY47544	Canola	extracellular	46.67	68.29
EES07797	Sorghum	endoplasmic reticulum	68.89	68.13
HORVU1Hr1G057530.2	Barley	endoplasmic reticulum, plasma membrane, plastid	79.44	66.82
HORVU5Hr1G109380.2	Barley	cytosol, golgi, plasma membrane, plastid	77.22	56.73
CDX98638	Canola	extracellular	18.89	55.74
CDY37720	Canola	extracellular	17.78	52.46
CDX87773	Canola	golgi	19.44	52.24
Zm00001d032189_P001	Maize	extracellular, mitochondrion	18.89	42.5
Zm00001d051850_P001	Maize	endoplasmic reticulum	62.78	35.42
CDY30660	Canola	plasma membrane	35.56	25.4
CDX87925	Canola	cytosol	7.78	8.33

Protein Annotations

MapMan:18.10.1.1.1	GO:A0A078IBQ4	UniProt:A0A078IBQ4	EnsemblPlants:CDY47542	ProteinID:CDY47542	ProteinID:CDY47542.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006465	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00087617001	InterPro:LexA/Signal_pep-like_sf	PFAM:PF00717	PRINTS:PR00728	PANTHER:PTHR10806
PANTHER:PTHR10806:SF16	InterPro:Peptidase_S24_S26A/B/C	InterPro:Peptidase_S26B	MEROPS:S26.A04	SUPFAM:SSF51306	TIGRFAMs:TIGR02228
TMHMM:TMhelix	UniParc:UPI0004EEF9EA	:	:	:	:

Description

BnaC03g69200DSignal peptidase I [Source:UniProtKB/TrEMBL;Acc:A0A078IBQ4]

Coordinates

chrLK032720:+:137574..139194

Molecular Weight (calculated)

19946.7 Da

IEP (calculated)

6.352

GRAVY (calculated)

0.345

Length

180 amino acids

Sequence
(BLAST)

001: MGLVGETVDS IKSIQIRQLL TQAISLGMIV TSALIIWKAL ICVTGSDSPV VVVLSESMEP GFQRGDILFL HMSKDPIRAG EIVVFNIDGR DIPIVHRVIM
101: VHERENTGEV DVLTKGDNNP EDDRLLYAKG QLWLNRHHIM GRAVGFLSYV GWVTIIMTEK PIIKYILIGT LGLLVISSKD

Best Arabidopsis Sequence Match ( AT1G52600.1 )
(BLAST)

001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD

Arabidopsis Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.