Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37720 | Canola | extracellular | 95.08 | 95.08 |
| CDX87773 | Canola | golgi | 29.51 | 26.87 |
| CDY47544 | Canola | extracellular | 52.46 | 26.02 |
| CDY70157 | Canola | endoplasmic reticulum, golgi, vacuole | 55.74 | 22.22 |
| Os06t0273800-02 | Rice | endoplasmic reticulum, golgi, plasma membrane | 59.02 | 20.0 |
| CDY30100 | Canola | cytosol, endoplasmic reticulum, golgi | 59.02 | 20.0 |
| GSMUA_Achr2P06860_001 | Banana | endoplasmic reticulum | 59.02 | 20.0 |
| EES16720 | Sorghum | plasma membrane | 59.02 | 20.0 |
| CDX87924 | Canola | endoplasmic reticulum | 57.38 | 19.44 |
| Zm00001d037926_P001 | Maize | endoplasmic reticulum | 57.38 | 19.44 |
| Zm00001d009866_P004 | Maize | endoplasmic reticulum | 57.38 | 19.44 |
| GSMUA_Achr8P30160_001 | Banana | plasma membrane | 57.38 | 19.44 |
| EES19438 | Sorghum | endoplasmic reticulum | 57.38 | 19.44 |
| CDY65907 | Canola | cytosol, endoplasmic reticulum, golgi | 57.38 | 19.44 |
| CDY40147 | Canola | cytosol, endoplasmic reticulum, golgi | 57.38 | 19.44 |
| CDY21864 | Canola | endoplasmic reticulum | 57.38 | 19.44 |
| CDY20147 | Canola | endoplasmic reticulum | 57.38 | 19.44 |
| CDX97698 | Canola | cytosol, endoplasmic reticulum, golgi | 57.38 | 19.44 |
| CDY60554 | Canola | endoplasmic reticulum | 55.74 | 18.89 |
| CDY47542 | Canola | endoplasmic reticulum | 55.74 | 18.89 |
| Os05t0297900-01 | Rice | plasma membrane | 55.74 | 18.89 |
| EES07797 | Sorghum | endoplasmic reticulum | 52.46 | 17.58 |
| HORVU1Hr1G057530.2 | Barley | endoplasmic reticulum, plasma membrane, plastid | 55.74 | 15.89 |
| HORVU5Hr1G109380.2 | Barley | cytosol, golgi, plasma membrane, plastid | 55.74 | 13.88 |
| CDY30660 | Canola | plasma membrane | 47.54 | 11.51 |
| Zm00001d032189_P001 | Maize | extracellular, mitochondrion | 14.75 | 11.25 |
| Zm00001d051850_P001 | Maize | endoplasmic reticulum | 54.1 | 10.34 |
| CDX87925 | Canola | cytosol | 4.92 | 1.79 |
Protein Annotations
| EnsemblPlants:CDX98638 | EnsemblPlantsGene:GSBRNA2T00106685001 | GO:A0A078EH28 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0006465 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:Peptidase_S26B | PANTHER:PTHR10806 | PANTHER:PTHR10806:SF16 | ProteinID:CDX98638 |
| ProteinID:CDX98638.1 | SignalP:SignalP-noTM | UniParc:UPI0004EF19A9 | MapMan:35.2 | : | : |
Description
BnaA03g44230D
Coordinates
chrLK031906:-:310456..311059
Molecular Weight (calculated)
6804.7 Da
IEP (calculated)
11.161
GRAVY (calculated)
0.467
Length
61 amino acids
Sequence
(BLAST)
(BLAST)
1: MIVTSALIIW KALICVTGTE SPVVVVLSRS MEPAFKRSRD VPSSIVPSKF MRGRIQEKLM L
001: MGFIGETVDS IKSIKIRQVL TQAITLGMIV TSALIIWKAL ICVTGSESPV VVVLSESMEP GFQRGDILFL RMTDEPIRAG EIVVFSVDGR EIPIVHRAIK
101: VHERGDTKAV DVLTKGDNND IDDIGLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
101: VHERGDTKAV DVLTKGDNND IDDIGLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD
Arabidopsis Description
Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:A0A178VNL0]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.